Xenopus tropicalis (tropical clawed frog): 100494387
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Entry
100494387 CDS
T01011
Symbol
tlr9
Name
(RefSeq) toll-like receptor 7
KO
K05404
toll-like receptor 7
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04142
Lysosome biogenesis
xtr04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
100494387 (tlr9)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
100494387 (tlr9)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
xtr04054
]
100494387 (tlr9)
Pattern recognition receptors [BR:
xtr04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
100494387 (tlr9)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
TIR
TIR_2
LRR_5
LRRCT
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
100494387
NCBI-ProteinID:
XP_017948709
Xenbase:
XB-GENE-486908
UniProt:
A0A8J0T2J5
LinkDB
All DBs
Position
4:<126164531..126168151
Genome browser
AA seq
1035 aa
AA seq
DB search
LHLYNIVSLHAQQKRKVFLPLSLGLILGACLAFCKIPHFLPCDDFNNASTVICRERQLIH
VPHIVSQSVKVFDLAINEIRLLANSTFSGVPNLVILNLSDNCQPSNLRPYKEICRLIIEP
HALVSLKSLTNLDLSGNSLTSIPPLPENIKFLNLNLNQIHMISGWEFSRLNNVKMIRLGY
NCFYSKQCEPFHLSDSAFINNEFLEELALSFNNITSFPQNLPSSIRILDLSENKISKIDR
EDLCNLNNLHSLDLQWNCQRCDHALQACYPCKNNSALLLVPGVFDCLHKLSYLNLRGNSL
HTLHSSLFSSLTNLSHLVLSDNFLNLETETFFSALTNVKELNLDFNFKPYSMYERLVLNS
NVARMKSLERITIVGYFFNVLDEEGIMPLLSLPNLREISLRTNFILKVNLSMLFTHKPLR
FISLSENLISFEEHKHGQKLAMHPPLFDRGNQVDGGWMDSHCGPKQVEAGEVEYPGCWQY
NHSVDLSFNNIGSIYPDEFLGMDEIECLNMSYNYINQRLNGTQFGHLKSLRHLDLSHNRF
DMYYYKALSELPRLKILNLAHNDYQFMMKGVNHRLDFLENLTSLVELNLNNNFIGLRITR
ELKSHSLETLRFRNNELGSSWQYGKDTYLNMFTNLRSLKILDISYNQLPVIPNEVLEKLP
ESLQKLNLSHNKLYTFNWAKTAHLGNLAILDLGFNALTKLRANLTESNIAFLNLTYNKIN
SLDKDFFDSFSELKQLILSNNLIKTIHITSFPINFLQNLDSLDVSGNPFQCTCKAYWFIT
FLMETEVTVDHLSTGMKCDSPDSLRGRSLLSMDPQSCQELYGHVCFIWSSILVIFLMVIP
TIWNLFFWNLWYAGHLIVATLRSYTKLHDKSTEHFDAFIAFNTKNSSVRDWVYNELLVQL
ESPERGGFTLCLEERDWIAGRSSIENLYDSIYRSKKTIFIITREWFNCGLLRHAFFMSNQ
RLLDEKKDVVALVVLDHKMKMSQYFLTRKRLCPKSFLNWPCNPKAHSHFWHMLRIYIRQD
SRRCCGSQLKKYVDK
NT seq
3108 nt
NT seq
+upstream
nt +downstream
nt
ctgcatttatataacattgtttccttacatgctcaacagaaacgaaaagtgttcctaccg
ctcagtctgggcttgattttaggagcgtgtctggccttctgcaagattccacatttcctt
ccatgtgatgatttcaacaatgcttcaactgtaatatgtagggagcgtcaactaatacac
gtccctcacattgtttcacaaagtgtcaaagtctttgatctggcaataaatgaaatacgc
ttgctggctaactccaccttctctggggtaccaaatcttgtgattcttaacctaagtgat
aattgccaaccaagcaacctgagaccttacaaagaaatctgtaggttgatcattgagcca
catgccttggtcagtctgaagagcttaaccaatctagacctcagtggcaacagcctgacc
tccatacctccccttcctgaaaacataaagttcttgaatctcaatttaaatcagattcat
atgatttcaggatgggaattttccaggcttaacaatgtgaaaatgatacgtcttggatac
aactgtttctacagcaagcaatgtgaaccatttcatctatcagacagcgcctttataaac
aacgagttcttagaggaattggcattatcttttaacaatattacatcatttccacaaaat
cttccatcttccattcgtatccttgacttgtcagaaaacaagatctcaaaaatagaccgt
gaagatttgtgcaacttgaataacctgcatagtcttgatctgcaatggaattgccagcgc
tgtgatcatgcccttcaggcttgctacccatgcaaaaataacagtgccttgctactagtc
ccaggggtctttgactgccttcataagctttcctatctaaaccttagggggaactcactg
cacacattgcatagttctttattcagtagtttgactaatctaagtcatttggttctctca
gacaacttcttgaaccttgaaactgaaacattcttctcagctctaacaaacgtcaaagag
ctgaatttagattttaatttcaagccctattcaatgtatgaaagactagtcctaaattct
aatgtcgccaggatgaagtctctggagagaataacaattgttggatacttctttaatgtc
ctggatgaagaaggtataatgcctttgcttagcttgcccaacctcagagaaattagcctc
aggactaactttattctaaaggttaacttaagtatgctattcacacataaacctctgcgc
tttataagcttgtcagaaaatttaatctcttttgaagaacataaacatgggcaaaagctg
gcaatgcatccacctctctttgatagaggaaaccaagtagatggaggatggatggattct
cattgtggccctaaacaagtggaggcaggggaggttgagtacccagggtgctggcaatat
aatcattctgttgatttgtcttttaataacatagggagtatataccctgatgagtttttg
ggcatggatgaaattgaatgcctgaacatgagctacaactatattaaccagcgcttgaat
ggaactcaatttggtcacttaaagtcattacgccacttggatctctcacacaacaggttt
gacatgtactattataaagctttaagtgaacttcccagacttaagatacttaatttggca
cacaatgattatcagtttatgatgaaaggagtaaaccacaggctcgacttccttgaaaac
ctaacatctttggttgaactaaacctcaacaataactttattggtctacggataacgagg
gagttaaagagccattccttggaaacacttcgctttcgaaataatgagctcggaagttcg
tggcagtatggcaaagacacatacttaaatatgttcacaaatcttaggagtctaaaaata
ttggatataagttataatcagcttccagtcattccaaatgaagtcttggaaaaactacca
gagtcgctacagaaactcaacctttcccataataaactctatacctttaactgggctaaa
actgcacatctgggcaatctagcaatcttggaccttggcttcaatgctctgacaaaatta
cgtgctaatctaacagaaagtaatattgcctttctgaatctgacatacaataaaattaat
tctctggacaaagatttctttgattcattcagtgaactgaaacagcttatacttagcaac
aatctcattaaaactatacacataaccagctttcctataaatttcctacaaaaccttgat
agtctcgatgtaagtggtaatcctttccaatgcacttgtaaagcttattggttcattaca
ttcttgatggagaccgaagtaacggttgatcatctttccacaggaatgaaatgcgactca
cctgatagtctgagagggaggtctctcctctcaatggacccacagtcatgtcaagaatta
tacggacatgtatgttttatctggtcaagcattttggtgatatttttgatggtcatcccc
accatatggaacctttttttctggaacctgtggtatgcaggtcacctaattgtggcaact
ctcagaagttacacaaaacttcatgacaaatccacagaacattttgatgcctttatagcc
ttcaacacaaagaacagttctgttagagattgggtttataatgagctgttggtgcagctg
gaaagtcctgagagaggaggatttactttgtgcttggaagaaagagattggatagctggg
agatcaagcattgagaacctctatgattctatctacaggagcaagaagactattttcatt
attacacgtgaatggttcaactgcggtcttctgcgccatgcctttttcatgtccaatcaa
agactgctcgatgaaaaaaaagatgtggtggccttagttgttctggatcacaagatgaaa
atgtctcagtattttctaacgaggaagaggctttgccccaagagcttcttgaactggcca
tgtaaccccaaagcacactctcacttctggcatatgctgcgtatatatataaggcaggac
agtcgccgttgctgtggctctcaacttaaaaaatatgtggacaaataa
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