Xenopus tropicalis (tropical clawed frog): 100494735
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Entry
100494735 CDS
T01011
Symbol
tap1
Name
(RefSeq) antigen peptide transporter 1
KO
K05653
ATP-binding cassette, subfamily B (MDR/TAP), member 2 [EC:
7.4.2.14
]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr02010
ABC transporters
xtr04145
Phagosome
xtr05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
100494735 (tap1)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
100494735 (tap1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
100494735 (tap1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xtr02000
]
100494735 (tap1)
Enzymes [BR:
xtr01000
]
7. Translocases
7.4 Catalysing the translocation of amino acids and peptides
7.4.2 Linked to the hydrolysis of a nucleoside triphosphate
7.4.2.14 ABC-type antigen peptide transporter
100494735 (tap1)
Transporters [BR:
xtr02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
100494735 (tap1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_15
AAA_22
2TM
Motif
Other DBs
NCBI-GeneID:
100494735
NCBI-ProteinID:
XP_031747270
UniProt:
A0A6I8RDH0
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Position
8:complement(73337158..73376843)
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AA seq
716 aa
AA seq
DB search
MNPFWTLSCLFAIDIATLPLIGSFLSHILPSDLPLILPWLVGLSRLLFLILSLRVLSRSF
RLPFHRDHLNLYCTVLSLLVPIYISLTSLVNPHRSANLLYSWTHWVILFWCYLLTLISAV
VVHQLLPYSTEKKDAEVTAASLGRLIALLKPYIFRFLLVAFFLVLSSWGELALPSYTGHM
TDWIANKKDPSSFTTAIIAMSLITVASAVAEFVCDCIYFMTMSLIHSHTQGLLIRSVLRQ
EITFFDSTSTGDITSRVTTDTITMAESLSSNLSLLMWYFMRLVLLLTYMVMLSTKLTFFT
ILCLGIVILVPKLSGTFYQNLAVQVQQSLSNANQVALETFSNMKTVKSFANEEGECQRYE
SKLQETYQLNKMEALYYAISMVANNFSGLALKVGILYYGGRLVTNGKVSGGDLVSFVLYE
LQFSSAVEVLLRMYPDVRKAVGSSEKIFEYMDRIPKLPSAGTLAPPDLKGVIQFKNVTFS
FPTRPDMTALQDVSFELPPGKVTALVGPCDAGKSTVVQLLMRFYEPQKGAILLDGKPLSQ
YDNQYYRKKVSLVSQEPTLSACSLQDNIAYGMGNVSFRSVQEAAKTADAHDFISEMANSY
QTGVGPKGGLLSVGQKQRVALARALLRKPKVLILDDATSSLDVESELKVQNAIYDQLAER
TVLLISHRMNTVQRADHILVLEGGCITEEGTHEQLMAQKGSYWKLWQKQFSSFQRE
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgaatcccttctggactctgagttgtctttttgcaattgatattgccaccttgccctta
ataggatcatttctctctcacatcttaccttcagatctccctctaatattaccttggctg
gttggcttgtcacggttgctgtttttgatcttgagtttacgtgtactcagtagaagcttc
aggctcccattccacagagatcatctaaacctgtactgcactgtactaagtctgcttgtt
cctatttatattagtctcacctctttagtgaacccacatagaagtgccaatctgctttac
agctggactcactgggtcatcttgttctggtgctacctgctcacactgatttcagcagtt
gttgtgcaccagctgttaccatacagcactgagaagaaagatgctgaagtgactgctgct
tctttgggccgattaattgccctcctaaaaccctatatattcaggtttttgcttgtggca
ttctttctggtcctgtcatcatggggagaattagctctcccctcttacactgggcatatg
acagactggatagccaacaagaaggacccctcatcctttacaacagcaatcatagcaatg
agcttgatcacagttgcaagtgcggtggcagaatttgtttgtgattgtatctactttatg
accatgagtttgatacacagccatactcagggactactcatccgttctgtcttgaggcag
gaaatcacattctttgattctacgtcaacaggtgatatcacatctcgtgttaccacagat
acgataacaatggcagaatctttgtccagtaatctgagcttgttaatgtggtattttatg
agactggtattactcctcacttacatggttatgttatctacaaaactgaccttcttcacc
attttgtgtcttggcatcgtcatacttgtaccaaaactgtcagggaccttttatcagaat
ttggctgtgcaggtccaacagtccctctccaatgctaaccaggtggccttggaaacattt
tccaatatgaaaactgtgaaaagctttgctaatgaggaaggagaatgtcaacgatatgag
tcaaaactgcaagaaacataccaactaaacaaaatggaggctttatattatgcaatatct
atggtggccaacaatttctctggactagcacttaaggttggcatcttgtactatggtgga
cgtttggttacaaatggaaaggtcagtggtggtgacctggtgtcgtttgtcttgtatgaa
ctgcagttctcttcagctgtggaggttctgctccgaatgtatccagatgtcaggaaagca
gtgggctcttcagagaagatttttgaatacatggatcgtatcccaaaattgccatccgca
ggaacacttgctccacctgatcttaagggtgtaatccaattcaagaatgtcactttttct
tttcccacacgtcctgatatgacagctctgcaggatgtttcctttgaactgcccccaggt
aaagtaactgcactggtgggtccctgtgatgctggcaaatccactgtggtacaactactg
atgaggttttatgagccacaaaaaggggcaattcttctggatggcaaaccactatcccag
tacgacaatcagtactatcgcaaaaaggtatcactggttagtcaggagcctactctctct
gcctgctctctgcaagataatattgcatacggtatgggaaacgtttctttcagaagtgtt
caggaggcagcaaagactgcagacgcccatgatttcatctcagaaatggcaaatagctac
caaacaggtgttgggccaaaaggaggcctgctctcggtggggcaaaagcaacgggtagca
ttagcaagagctttactgaggaaacctaaggtcctcatactggatgatgccactagctca
ctagatgtagagtctgagctgaaggtgcaaaatgccatctatgatcaacttgcagagagg
acggttctacttatctcccaccgaatgaacactgtgcagagagctgatcatatcctagta
cttgaaggagggtgtatcacagaggaggggacacatgaacagctaatggcacagaagggc
agctactggaaactatggcaaaagcaattcagcagttttcaaagggaatga
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