Xenopus tropicalis (tropical clawed frog): 100495109
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Entry
100495109 CDS
T01011
Symbol
kdrl
Name
(RefSeq) vascular endothelial growth factor receptor kdr-like isoform X1
KO
K05096
FMS-like tyrosine kinase 1 [EC:
2.7.10.1
]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04010
MAPK signaling pathway
xtr04020
Calcium signaling pathway
xtr04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
100495109 (kdrl)
04020 Calcium signaling pathway
100495109 (kdrl)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
100495109 (kdrl)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
xtr01001
]
100495109 (kdrl)
Enzymes [BR:
xtr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
100495109 (kdrl)
Protein kinases [BR:
xtr01001
]
Receptor tyrosine kinases (RTK)
VEGFR family [OT]
100495109 (kdrl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Ig_3
I-set
Pkinase
Ig_2
ig
VEGFR-2_TMD
VEGFR-1-like_Ig-like
Ig_VEGFR-1-like_5th
V-set
VEGFR1-3_N_Ig-like
Ig_4
Receptor_2B4
Haspin_kinase
BiPBP_C
Motif
Other DBs
NCBI-GeneID:
100495109
NCBI-ProteinID:
XP_017952305
Xenbase:
XB-GENE-6071790
UniProt:
A0A803JLH7
LinkDB
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Position
8:46866178..47003073
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AA seq
1329 aa
AA seq
DB search
MCCQCPPCLALLLLLLQGLLCAAGDYRERSRLPKPVISPRKDHVHINKGESFTFTCRGSG
KLKWDLAEMSHLSNRRFSILPQCRGPDENQRVCSQLTISNAHPNDTGLISCHYRGSSNLK
RIATIYLYVKDDAQPFVEERTEDPELITYTNEEMVIIPCRVTSPDYRVSLRGLFSKKQVN
TPEMTWNPKKGFIFSSPPNSVQEVLECVAVVNGKKFSSLYILQKENYNVTITTVTASATR
LVVGDPLTLFCKGETGYNSRVLLDWVHGNKVLKSISTFSNEQTPYVGTRTVNISHISLHE
QGVYTCRDRIYTQNFKKIYIRVYEKGFLNISTPDGQIHEVNEGTKQVKLTAKVDALPKPV
VTWYRNGVPIGANHTCYKPEPEDYSLVIKNPSEKDSGSYTMVLSNSWYNKSISFILIVNV
KPKIYEKETDFNIPKPLLLGEPHNFRCTVYGHPLPQIRWEFQPCHSSNTLCEVDDAIPRI
PVIPERSHTNESISDARPVIEESIMEQTKNKLVSILTTSRYSNQSGIFFCIASNVMAEVK
RSMHFILSDIKPEETKERTEALHGSDVKLVCRAERYIYTNLSWTFPGKEEIPCLEEVHPQ
MTKNTYQEYTMSCLLLLKNVTQELAGTFRCSATNLYTGMQEEKNVIDLVIKEKEAPQVIQ
ELVPMVVNSSSTLFLECRVNGTPTPTIIWLKNGYVIKPASGITLVYNSTLVIERVKKDDE
GVYICEAVNELGKVSTSAFITVQGVEEKSNIEVIILVCTGVAATLFWLLLTLFIRKLKKP
HGSDMKTGYLSIIMDPDEIPLDEQCERLPYDSSKWEFPRDRLSLGKTLGHGAFGKVVEAS
AFGIDKSSTCKTVAVKMLKECATNNERKALMSELKILIHIGHHLNVVNLLGACTKPGGPL
MVIVEYCKYGNLSNYLRSKRGDFIAYKYQEAEKALHGSISDLSELIKRRLESVASTGSSA
SSGFIEDKSYSDSEEEDEDHEDVSKKLLSMEDLICYSFQVAKGMEFLASRKCIHRDLAAR
NILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPEAIFDKIYTTQSDVWSFG
VLLWEIFSLGASPYPGVQIDEDFCCRLKEGTRMRAPDYCSPEIYQTMLDCWQGEPTDRPT
FTDLVERLGDLLQASVQQEGKDYIPLNMALCTDGETKAKTGSKEPSQRDSFTRWSTLETG
NNNKNRPLSVKTFDEVPVGKDKVLTEEFESDSGMVLSTMEVKNLKRQETRSWPFGIIAHA
MKAVSKSKESVLGDNDRSIFKYQPPSHIEEDPLDLTLDELVLMPLDLTLECHSPPPDYDS
VVHYSTPPV
NT seq
3990 nt
NT seq
+upstream
nt +downstream
nt
atgtgctgccagtgtcccccctgcttggctctgctgctgctgctgctacaggggctgctc
tgcgctgcaggtgactatcgggagcgcagtcgtttacccaaacctgtaatcagccctcgg
aaagaccatgttcatattaacaagggagaatctttcacatttacctgcaggggatctggg
aagctgaaatgggatttggcagaaatgtcccatttatctaacagaaggttcagcatattg
ccacagtgtcgcgggcctgatgagaaccagcgtgtttgcagtcagttaacaatctcaaac
gcccaccccaatgacacagggctcatcagttgtcattacaggggaagtagcaatctaaag
cgaatagccacaatctacttgtatgtcaaagatgatgcccagccatttgttgaagaacgc
acagaagatccagaattgatcacatatacaaatgaagaaatggttataataccttgtcgg
gtcacctctccagactacagagtcagcctaagagggctattctcaaagaaacaggtgaac
actccagaaatgacatggaacccaaagaaaggtttcatcttttcaagcccacctaattct
gttcaagaagtcctggaatgcgttgcagtggtgaatgggaagaagttctcttcgttgtac
atactacagaaagagaattacaatgtcactattactactgtgaccgcaagtgcaaccaga
ttggtggtgggggatccactgacacttttttgcaaaggagaaactggatacaattcaagg
gttcttttggactgggtgcatggcaacaaggttctaaaatccatttcaacgttcagtaac
gaacaaactccttatgttggaacaagaacagtgaacatctcgcatatttcattgcatgaa
cagggagtttatacctgcagggatagaatatatacacaaaatttcaaaaaaatttacatt
cgtgtttatgagaagggattcttgaacataagtactccagatgggcaaatccatgaagta
aatgaaggtactaaacaagttaagctgactgctaaagttgacgcattgccaaaacctgtc
gttacttggtacaggaatggagtgccgataggagcaaatcacacctgttacaaacctgag
ccagaggattacagcctggtcataaagaacccaagcgaaaaggattctggaagttatacc
atggttctcagcaactcttggtataataagagcatcagcttcattttgattgtcaatgtt
aagccaaagatttatgaaaaggagacagactttaacatacccaaacctcttctcttgggt
gaaccccataacttcagatgtacagtttatggacatccccttccacaaattcgctgggag
tttcagccatgccatagttcaaatacactgtgtgaagtagatgatgcgattccaaggatt
cccgtgataccggaacgctcacacacaaatgagtctatttcagacgcaagaccagtgata
gaggaaagcattatggagcagacaaaaaataagcttgtgagcatactgactacctcacgg
tacagcaatcagtctggaatcttcttctgtatagcttcaaatgtgatggctgaggtgaag
agatccatgcacttcattctttcagacattaaacccgaagaaacaaaggagaggactgaa
gctctgcatggaagtgatgtcaagctggtctgcagggcagaaagatatatctacacaaac
ctgtcttggaccttcccaggcaaagaggagattccatgcttagaagaggtgcatcctcaa
atgaccaagaacacgtatcaggaatacaccatgagttgtttactgttgctgaagaatgtg
acacaagaacttgcaggaacattcagatgttcagctacaaacctctataccggaatgcag
gaggagaaaaatgtcattgatcttgtgattaaagagaaggaggctccacaggttatacag
gagcttgtgccgatggttgtaaacagcagcagcaccctgttcctggaatgtagagtcaat
ggaacgcctacacccacaattatctggctgaagaatggctatgtgattaaacctgcttct
ggcattacccttgtgtacaatagcactctggtcattgagagggtgaagaaggatgacgaa
ggggtatatatatgtgaagctgtgaatgaactggggaaagtcagtacatctgccttcatt
acagtacaaggtgtcgaggaaaaatcaaacatcgaagtgatcatcctcgtctgtacaggg
gtggcagccacattgttttggctacttcttaccttattcatacgaaagctgaaaaagcca
catggctccgacatgaagacaggttatctgtccattattatggacccagatgagatacct
ctggatgagcagtgtgaaaggctgccctacgacagcagcaagtgggaatttccccgtgac
agactcagccttggaaaaactctcggtcatggtgctttcggtaaggtggtggaagcgtct
gcttttggcattgataaatcctcaacctgcaaaacagttgctgttaagatgcttaaagag
tgtgcaacaaacaacgaacgtaaggctctaatgtcagaactgaagatccttatccatatt
ggccatcatctcaatgtcgtgaatttattgggagcatgtaccaagcctggtggcccttta
atggttatagtagaatactgcaagtatggaaatttgtctaattacttaagaagcaaacgt
ggtgactttatagcatataagtatcaggaagcagagaaagccttgcacggctcaatcagc
gatctctctgaactaatcaagaggcgccttgaaagtgttgccagcactggaagctcagct
agctctggattcattgaagataaaagctacagtgactccgaggaggaggatgaagatcat
gaggatgtcagtaagaagctgctaagcatggaagatctcatatgctacagcttccaggtt
gccaaaggcatggagttcctggcatcaagaaagtgtattcaccgggatttggcagccagg
aatatccttctgtctgaaaataatgttgtaaagatctgtgattttggtttggcccgtgat
atatacaaagatccggactatgtgcgaaaaggagatgcacgattacctcttaagtggatg
gcacctgaagctatttttgataaaatctatacaacacagagtgatgtgtggtcctttggt
gttctcttatgggagatattttcccttggtgcttcaccctacccgggagtgcaaattgat
gaagatttctgctgtcgactgaaggaagggactcgcatgagggccccagactattgcagt
cctgaaatttaccagaccatgctggattgctggcagggggagccaacagacaggcccacc
tttaccgatctggtcgaacgcctaggagatctccttcaggccagtgttcaacaggaggga
aaggactatattcctctgaacatggctttgtgtactgatggagaaaccaaggcaaaaact
ggaagcaaagaaccaagtcaaagagattccttcacacgatggagcacactggaaactgga
aacaacaacaagaaccgaccactgagtgtgaagacctttgacgaggtgccagtgggaaag
gacaaagttctcactgaggagtttgagtcggacagcgggatggtcctatctaccatggaa
gtaaagaacctaaagcgacaagaaacccggtcatggccatttggaattattgctcatgca
atgaaagcagtgagtaagagcaaagaatcagtgttaggagacaatgacagaagcattttt
aaataccagccgccttcccatattgaagaagaccctttggatctcacacttgatgagctt
gtccttatgccattggatcttaccctggaatgccatagcccacctccagattatgactct
gttgtccattattcaacaccaccagtttag
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