Xenopus tropicalis (tropical clawed frog): 100495149
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Entry
100495149 CDS
T01011
Symbol
ap4b1
Name
(RefSeq) AP-4 complex subunit beta-1
KO
K12401
AP-4 complex subunit beta-1
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
100495149 (ap4b1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xtr04131
]
100495149 (ap4b1)
Membrane trafficking [BR:
xtr04131
]
Endosome - Golgi transport
Others
AP-4 complex
100495149 (ap4b1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Cnd1
B2-adapt-app_C
HEAT_2
HEAT
EntA_Immun
PDS5
Motif
Other DBs
NCBI-GeneID:
100495149
NCBI-ProteinID:
XP_002932178
Xenbase:
XB-GENE-949306
UniProt:
F6XFZ2
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All DBs
Position
2:complement(62609748..62637752)
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AA seq
724 aa
AA seq
DB search
MPYLGSEDAVKELKRALSNPNIQADRLRYRNVIHKVIRHMTQGVDVSSVFMEMVKASATV
DIVQKKLVYLYMCTYACQKPDLALLAINTLCKDCSDPNPMVRGLALRSMCNLRMPGIIEY
IQQPIHNGLRDKASYVRRVAVLGCSKMHSQQGDVEVDGVVVNELYSLLRDPDPIVVVNCL
RALEEILKGEGGVVINKPIAHHLLNRMAELDQWGQSEVLGFLLRYNPKTEDELFDILNLL
DNFLKSNHTSVVMGATKLFLVLAVEFPNVQRDVLGRLKGPLLAASASESKEMCFAALCHV
REILRSMPGHFSSHYKKFFCSYNDPHYIKSQKMDILCELVNDENVHNVLEELRICCTDIS
VQLAQTAIFAIGRIAKTFSEKCVKILSQLLEFNQEHITSAVIQTFRDLVWLCPQCIAKVC
LALPGCEEIIQDNEGKRALIWLLGMHGDVISNAPYILEDFVDNIKTEISPTVKIELLTAV
VRLFLSRPAECQDMLGRLIYYCIEEEIDMAVRDRGLFYYRLLASGVNEAKQVMNSPKSDP
TLSVLENQTDQPINTWVPAFNTLMPLHDIKHGLALTAGSEGDHHVSEEINLKADLGNPLD
AADLTLESNITMTPEVYEMSWLSTDTACECSLNWKTGVQPDILQTSLHLMNIFTIAKSKT
AANPWKSYLYAQDSSGNLFLIELRLFTDAPSLDVSVKQNSKNDQGLQNFMTILRTAISAI
LDLS
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgccatatctggggtcagaggatgctgtcaaggaacttaagagagctctttctaatcct
aatatccaggcagatagattgcgatatagaaatgtcattcacaaggtcatcaggcatatg
acccaaggagttgatgtgtccagtgtattcatggagatggttaaggcaagtgcgactgta
gatatagtgcagaagaagctggtctacttatacatgtgcacatatgcttgtcagaaacct
gatctggcactattagccatcaacactctatgcaaagactgttcagacccaaaccccatg
gtgagaggattggcattgcgaagcatgtgcaacctcaggatgccaggtatcattgaatat
atacagcaacctatacacaatggccttcgtgataaagcttcatatgtgaggagagttgca
gtgttgggatgttcaaaaatgcattcacagcaaggtgatgtagaagtagatggggttgta
gtgaatgaactgtacagtcttctgagagacccagatcctattgtcgtggtgaactgttta
cgtgcattagaggaaatcctaaaaggagaagggggcgttgtaatcaacaaaccaatagct
catcatttattaaacagaatggctgaactggatcagtggggacaaagtgaagttttaggc
ttcctccttcgatacaaccctaaaacggaagatgagctttttgatatcttaaacttacta
gataactttctaaagagtaaccatactagtgtagttatgggagccactaaactcttcctg
gttcttgcagtggagtttcctaatgtgcaaagagatgttcttggccggttaaaaggtcca
cttctggctgcttctgcttcagaaagcaaagaaatgtgttttgctgccctttgccatgtt
cgagagattctgcgtagcatgcctggccattttagtagccactataaaaagtttttctgt
tcatacaatgatccacattacatcaagagtcagaagatggacattctttgtgagctagtg
aatgatgaaaatgtgcacaatgttctggaggagctaagaatttgctgcactgacatatca
gtacaacttgcacaaactgctatttttgcaataggccgcattgcaaaaacatttagtgag
aaatgcgtgaaaatcttgtcacagcttcttgaatttaatcaagagcacattacctcagct
gttatacagactttccgagaccttgtttggctatgtccacagtgcattgcaaaagtgtgc
ctggctctgcctggttgtgaggaaattattcaagataatgaggggaaacgtgccctaata
tggcttttggggatgcatggagatgtaatatctaatgcaccttatattctggaggacttt
gtggataacattaagacagagatatctcctacagtaaaaatagagctgctgactgccgtg
gtgcggttgtttctctctcgtccagctgaatgtcaggacatgctggggcgtctaatttat
tactgtatagaagaggaaattgacatggctgtaagagatcgagggcttttctactaccga
cttttagcgtctggtgtaaatgaggctaagcaagtgatgaacagtccaaaatctgatcca
acattgagtgtcttggaaaaccaaaccgaccagccaatcaatacctgggtcccagctttt
aatactttgatgcctctacatgatataaagcatgggttagctttgactgccggatcagag
ggtgatcatcatgtgtctgaagaaataaatttaaaagccgatttaggaaatccacttgat
gctgctgacctcactctagagagcaacattacaatgacaccagaggtatacgagatgtca
tggttatctacagatacagcttgtgaatgttccttaaactggaaaacaggtgtgcaacca
gacatacttcagacatcattacatttgatgaatatatttaccattgccaaaagcaagact
gctgcaaatccatggaaatcgtatctttatgcacaggatagctctgggaatttatttctg
atagagcttaggctctttacagatgcgccttcactggatgtgtcagtaaagcagaactcg
aagaatgaccaagggcttcaaaactttatgacaattttacgaactgcaatttcagcaata
ctggatctgtcctga
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