Xenopus tropicalis (tropical clawed frog): 100495336
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Entry
100495336 CDS
T01011
Symbol
mhc2a
Name
(RefSeq) class II histocompatibility antigen, M alpha chain
KO
K06752
MHC class II antigen
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04145
Phagosome
xtr04514
Cell adhesion molecules
xtr04672
Intestinal immune network for IgA production
xtr05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
100495336 (mhc2a)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
100495336 (mhc2a)
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
100495336 (mhc2a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
100495336 (mhc2a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xtr04147
]
100495336 (mhc2a)
Exosome [BR:
xtr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
100495336 (mhc2a)
Exosomal proteins of epithelial cells
100495336 (mhc2a)
Exosomal proteins of breast milk
100495336 (mhc2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C1-set
MHC_II_alpha
Ig_2
Ig_3
I-set
Foamy_BEL
Motif
Other DBs
NCBI-GeneID:
100495336
NCBI-ProteinID:
XP_002942060
Xenbase:
XB-GENE-481445
UniProt:
F7EMH0
LinkDB
All DBs
Position
8:73039954..73091535
Genome browser
AA seq
251 aa
AA seq
DB search
MDVWIMWSIWMLLLETLLVITLGAEQGSHILRQVLFCQPQSPSPVLLKMFDDEQMFQYSF
ADKSVVPRIPDFNKWTSQGVFSSSEFLAFDEELCTESMQNFTKAVVDITPETKGILDIKV
FTLHPLTIGKPNTLVCFISNIIPPTLNITWRKNSILLKDGISYTGYFALSNNEYQTFSYL
NFTPTYTDSYTCNAQESGKSTTTVAYWVPEYPTPSDILENTLCYSAIALGIVFLFLGFLF
LFLTWRLHRID
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atggatgtttggatcatgtggagcatttggatgttgctgttggagacgctccttgtgata
acgttgggggctgagcaaggcagccatattctgagacaggtcctgttttgtcagccacag
tccccatctccagttctgctgaaaatgtttgatgatgagcagatgttccagtacagtttt
gcagataaatccgttgtacctcgcatcccagactttaataagtggaccagccagggcgtt
ttctccagttctgaatttcttgcgtttgatgaagagttgtgtacagagtccatgcaaaac
tttaccaaagctgttgtagacattacaccagagacaaaaggcatattggatataaaggtt
tttacattacacccacttaccataggaaagccgaacacactggtttgttttatcagtaat
ataattcctcctactctcaatatcacctggaggaagaatagcattttgttgaaagatgga
ataagctacacgggttattttgccttgagtaataatgaataccagactttctcctacctc
aacttcactccaacgtacacagacagctatacttgtaatgctcaagagtctgggaaaagc
actacaaccgttgcatactgggttccagaatacccaaccccctctgatatactggagaat
actctctgttactcggctattgctcttggcattgtgttcctctttctggggtttctgttc
ctcttcttgacttggagactacatagaatcgattga
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integrated database retrieval system
