Xenopus tropicalis (tropical clawed frog): 100495826
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Entry
100495826 CDS
T01011
Symbol
ldlr
Name
(RefSeq) low-density lipoprotein receptor
KO
K12473
low-density lipoprotein receptor
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03272
Virion - Hepatitis viruses
xtr04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
100495826 (ldlr)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
100495826 (ldlr)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xtr04131
]
100495826 (ldlr)
Membrane trafficking [BR:
xtr04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
100495826 (ldlr)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
SGL
EGF_CA
Vgb_lyase
hEGF
EGF
Motif
Other DBs
NCBI-GeneID:
100495826
NCBI-ProteinID:
XP_002942891
Xenbase:
XB-GENE-962372
UniProt:
A0A6I8SL03
LinkDB
All DBs
Position
3:138972462..138986944
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AA seq
894 aa
AA seq
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MMKPALLPASFLLLLGLCHVSAISEVRKCDRSEFQCGDGKCIPYKWICDGSAECKDGSDE
SPETCKVVTCGADHFSCGGRLNRCIPLLWKCDGQTDCENGSDENDCTRKVCADDQFTCRS
GKCISLDFVCDEDLDCDDGSDESYCPAPTCNPAMFQCKDKGICIPKLWACDGDPDCEDGS
DEQHCEGREPIKTDKPCSPLEFHCGSGECIHMSWKCDGGYDCKDKSDEKDCVKPTCRPDE
FQCNDGTCIHGSRQCDREYDCKDLSDEEGCVNVTKCEGPDVFKCRSGECITMDKVCNKKR
DCRDWSDEPIKECGENECMRNNGGCAHICNDLKIGYECLCNEGYRLVDKKRCEDINECEN
PNTCSQICINLDGGYKCECREGYQMDPVTASCKSIGTVAYLFFTNRHEVRKMTLDRSEYT
SFIPRLKNVVALDMEIASNKIYWSDLTQRKIYSASMDKADNTSHHETVISSQIQAPDGIA
VDWIHGNIYWTDSKFSTISVANTEGSKRKTLFSDDLAKPRDIVVDPSQGFMYWTDWGLPA
KIEKGGLNGVDRYPLVTENIEWPNGITLDLTNQRLYWVDSKLHSLSCIDVTGQNRITVIS
DETHLAHPFGLTVFEDLVFWTDIENEAIFSANRLTGSNITKVAEDLLSPEDIVLYHNLRQ
PKAENWCESHHLGNGGCEYLCLPAPLITSRSPKFTCACPDGMHLGADMRSCVKEPVLPET
STTTTTSAPVTTTTTTRPTTRSTTLAKITSTTSTVAPQRPKMASTTVAPPRPTTESPKTT
QRMVTERVPDRTTWEPVTHSQLAGNKFANEGVVESARSHPTALYIVLPIVILCLVAFGGF
LLWKNWRLKNTNSINFDNPVYQKTTEEDQIHIGRSQDGYTYPSRQMVSLEDDIA
NT seq
2685 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagcctgcactactgccagcatccttcctgctgctccttggcttgtgccatgtg
tctgccatctcagaggttagaaagtgtgatcggagtgaattccaatgcggagatgggaag
tgtatcccctacaagtggatttgtgatggcagtgctgagtgtaaggatggatccgatgaa
tccccagagacttgcaaggtggtaacatgcggtgctgaccatttcagttgtggcggaagg
cttaaccgttgtattcccctgttatggaaatgtgatggccagacagactgtgaaaatggt
tctgatgagaatgactgtactcgtaaggtgtgtgctgatgaccagtttacatgccgaagt
gggaaatgcatctcccttgactttgtttgcgatgaagacctggactgtgatgacggtagc
gatgagagttattgtccagcccccacttgcaacccagccatgtttcagtgtaaagataaa
ggcatttgcatccctaaattgtgggcctgtgacggggaccccgactgcgaagatggttca
gatgaacagcactgcgaggggagggaacccatcaagactgacaagccctgctctcccctt
gagttccactgtgggagtggagaatgcatacacatgtcctggaaatgcgatgggggatac
gactgcaaggataaatccgatgagaaggactgtgtgaaacccacttgccgcccggatgag
ttccagtgtaacgatgggacgtgcattcatggcagccgccagtgtgaccgagaatatgac
tgcaaagatcttagcgatgaggagggttgtgttaatgtgacaaaatgtgaaggccctgat
gtattcaaatgccgctctggggagtgtatcacaatggacaaagtctgcaacaagaaaaga
gattgcagggactggtcagatgaacccatcaaggagtgtggtgaaaacgagtgcatgcga
aacaacggcggctgcgcccacatctgcaatgatcttaaaataggatatgagtgtttgtgc
aacgaagggtacagacttgtggacaagaaacgctgtgaagatattaatgaatgtgagaac
cccaatacctgcagtcagatttgcatcaatcttgatggaggctacaagtgtgaatgcaga
gaaggttatcagatggacccagtgactgcatcctgcaaatccatcggaactgtggcttac
ctgttcttcacaaaccggcacgaggtgaggaagatgacgctggatcggagcgaatacaca
agctttatccctcgccttaagaatgtggtggctttggatatggagattgccagcaacaaa
atctattggtctgacctgactcagaggaaaatatacagtgcatcgatggataaggcagac
aacacgtcccaccacgaaactgtgattagcagccaaatccaggctcctgatggcattgca
gtggactggatccacgggaacatctattggacagactctaagttcagcaccatttctgtg
gccaacacagagggatcaaaaaggaaaactcttttcagtgacgatctggcaaagccaagg
gacattgtggtggatccttctcaagggtttatgtactggactgactggggcctcccagcc
aagattgagaaaggaggcttgaatggagttgacagataccccttggttacagagaacatt
gaatggcccaacggcatcacattagacttaaccaaccaacggctatactgggtggactct
aagcttcactctctgtcctgtattgatgtcactgggcagaacagaataacggtcatatca
gacgagacccacctggctcatccttttgggctcaccgtctttgaggatcttgtattctgg
actgacattgaaaatgaggccatctttagcgcaaacagactgactggcagcaatatcacg
aaagtagcagaagatctcttgtctccagaggacattgtcttgtaccacaacctgaggcaa
ccgaaagctgaaaattggtgtgaatctcaccaccttggcaatggcggctgcgagtacctg
tgccttccagcaccgctcattacctcacgttctcccaaattcacctgtgcttgtccagat
gggatgcacctgggggcagacatgaggagctgcgtgaaagaaccagtgttaccagagacc
tctaccacaaccaccacttcagcaccagtcacaaccactacaacaacacgtcccactact
aggagcacaacactggctaagattacttcaactacctcaactgttgctccacagagacca
aaaatggccagcaccactgtagcaccaccaaggcctaccacagaatcccctaaaacaacc
cagagaatggttacagaaagagtccctgatcgtaccacatgggagcctgtgactcattca
caactagctggaaataaatttgctaatgaaggagtagttgaaagtgcccgatcccatccc
actgctctctacattgtgctccctattgtgatactttgccttgttgccttcgggggattc
ctcctctggaagaactggagattaaaaaatacaaacagcataaactttgataatcccgtg
taccaaaaaacaaccgaggaagaccagattcacatcggcagaagtcaggatggatacacc
tacccttcgaggcagatggtgagcttggaagatgacattgcttga
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