Xenopus tropicalis (tropical clawed frog): 100495902
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Entry
100495902 CDS
T01011
Symbol
ret
Name
(RefSeq) proto-oncogene tyrosine-protein kinase receptor Ret isoform X2
KO
K05126
proto-oncogene tyrosine-protein kinase Ret [EC:
2.7.10.1
]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04010
MAPK signaling pathway
xtr04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
100495902 (ret)
04020 Calcium signaling pathway
100495902 (ret)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
xtr01001
]
100495902 (ret)
Enzymes [BR:
xtr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
100495902 (ret)
Protein kinases [BR:
xtr01001
]
Receptor tyrosine kinases (RTK)
RET family
100495902 (ret)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
RET_CLD3
RET_CLD1
RET_CRD
RET_CLD4
Cadherin
RIO1
Pkinase_fungal
Haspin_kinase
Motif
Other DBs
NCBI-GeneID:
100495902
NCBI-ProteinID:
XP_002933941
Xenbase:
XB-GENE-485176
UniProt:
A0A6I8R222
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Position
7:50224807..50285009
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AA seq
1101 aa
AA seq
DB search
MAPAGWALCLLSLLQVASGLYFLTKDYDENLYVDQPAGTLLLHIHVMKDSPHETPHFRLC
PNSYLSRISFYHWFWIDEHTGILYLNRSLDRSDYEVFAQGSSLAVQKIILKVSTKPQPFL
DNNCDNAPFTRVHLTFRNITSSICSSLKPKDLCFNDKDLSFHIKENKPPGKLYKFHPRPI
VQSCPNVSVSYMLISDHSYPFRFNPNTSEVSLTHTMDREERENYDLVAKCLLRDSTSEVE
VEKSFQIKVDDEDDTAPFLPNGTDTANVVVEFKRKNGTVLGMLTVWDADSTPVYPAEASF
KKYAKTIVNNDRFILENFRVEHSFREVKFQPKGNLIRGTLHEYRLVLNKTMPITRNGSLL
VSVLVNDTEFHGPNGDVMLYFNVTILPVEIRFPNISYQYTVNRNADRYAQIEKICIENCK
LFEGVNVNYRLQTDNNTRAFSIIQGRESTFATLIVNDSDALATHESKEVVCTVFATNKHL
KEPVKTQIIIVLEGTPLKNEDNCPRSCSESKQKSECEECGGLGSLTGRCQWRQGHGEGIT
TNYSTCTPSLLTCPDGVCDAVESNNSTICPQDCTKITIIGGHEKGALSGIKAGYGTCFCL
LPDKCFCEKNIVEGPLCDDTCKTVIACGVFLSFIISVLLSSYFIHRYHKNSPKPPIASAE
MTFRRPAQSYPVSYSSNNARRPSLDSMENQVSVDTFKIPEDPKWEFPRKNLVLGKTLGEG
EFGKVVKATAFRLKGKAGYTTVAVKMLKESASQSELRDLLSEFNLLKQVNHPHVIKLYGA
CTQDGPLHLIVEYAKYGSLRSFLRESRKVGPSSLGGDSNRNSSYLDNPDERALTMGDLIS
FAWQISRGMQYLAEMKLVHRDLAARNVLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRI
PVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPERLFNLLKTGYRMEKP
ENCSDEMYNLMLKCWKQEPDKRPTFGEISKELEKMMVKSRDYLDLAASTPADSLLYDDGL
SEEETPLVDCNNAPLPRTLPSTWIENKLYGMSYPNWSEESPVPIPRFDANKSVFSRYAND
CVYANWMIPPSTAKFMEKFDS
NT seq
3306 nt
NT seq
+upstream
nt +downstream
nt
atggcacctgcagggtgggcactctgtttactctccctcttgcaagtggcctctggactt
tattttctaacaaaggactatgacgagaatttatatgtggatcaaccggctggcacacta
ctcctacacatccatgtgatgaaggactcaccacatgagacacctcacttcagactctgt
ccaaatagttatttaagtagaatctctttctaccattggttctggatagatgagcataca
gggatcctctacctcaaccggagtcttgacaggagcgactatgaagtcttcgcccaagga
agttcattagccgttcagaagataattctaaaggtgtcaacaaagccacaaccattttta
gataataactgtgacaatgcacccttcactagggttcatcttacctttagaaacattaca
tcctccatctgttcctcgcttaaaccaaaggacttgtgcttcaatgacaaagatctctcg
ttccacataaaggaaaacaaaccacctggaaaactgtacaaatttcacccccggcctatt
gtacagtcctgtcccaatgtcagcgtgagttacatgctaatttcagaccacagttaccca
tttcggttcaatcccaatacctctgaagtgagccttacacatactatggaccgagaggag
agggagaattatgatcttgtggccaaatgcttgctgagggattccacctcagaggtggag
gtagaaaaatcttttcagatcaaagtggatgatgaagatgacacagccccatttctccct
aatggaacagacactgctaatgtggttgtggagttcaaaagaaagaatgggactgtcctt
ggcatgctgactgtgtgggatgccgactccacacctgtgtatcctgcagaagccagtttt
aagaaatacgcaaagaccattgtcaacaatgatcggttcattctggaaaacttccgggtg
gagcacagctttagggaggtgaaattccagccaaaaggaaacttaatccgtggaacgctc
catgaatacaggttagtcctgaacaagaccatgcctattaccagaaatggatctcttctt
gttagtgttctggtgaatgacactgaatttcatggaccaaatggagatgtgatgttgtac
ttcaatgtgacaatcctaccagtggaaattagattcccaaatatttcataccagtatact
gtcaaccgaaatgcagaccgctatgctcagattgaaaaaatctgcatagaaaattgcaag
ctttttgaaggagtcaatgttaactacaggctgcaaacagacaataatactcgtgccttt
tcaattattcaaggaagagagagcacctttgctactcttattgtcaatgactctgatgca
ctggcaacccatgagagcaaagaagttgtctgtacggtgtttgccacaaacaagcacctg
aaggaaccggtcaagacacaaatcattatagtgttagaaggaacacctttgaaaaatgaa
gataattgtccccgatcctgttcagagagcaagcagaagtctgaatgtgaggagtgtggg
ggattgggctccctcactggaaggtgtcagtggagacagggacatggagaagggatcaca
acaaactattctacctgcacacctagtcttttaacgtgtcctgatggagtctgcgatgct
gtggaaagtaacaattcaacaatatgtccccaggactgcaccaagataaccatcattggt
ggacatgaaaaaggagctctctcagggataaaagctggatatggcacctgtttttgcctt
ctgcctgataaatgcttctgtgaaaaaaatattgtcgaaggaccattgtgtgatgacacc
tgcaagactgtgatagcatgtggagtcttcctatccttcataatctctgttctactttct
tcatacttcattcatcgataccataaaaactctccaaaacccccaattgcttctgctgaa
atgaccttccgccgccctgcccagtcttatccagtgagctactcttcgaacaatgccaga
cgcccatcactagactccatggagaatcaggtgtcagtggatacatttaaaataccggag
gatcctaagtgggaattcccacgtaaaaatctggttttggggaagactcttggtgaagga
gaatttggcaaagttgtaaaagcaactgcatttagactgaagggtaaagctggttacact
acagtggcggtaaagatgctaaaagagagtgcatcccagagtgagctgcgagatcttctg
tcagagttcaatcttctgaaacaggtcaatcatcctcatgtgatcaaactttatggggct
tgtacacaggatggtcctttgcacctcattgtagaatatgcaaaatatggctcgctgcgc
agttttctaagggaaagtcgcaaagtggggcctagctctttgggaggagattcaaatcga
aactccagctacctggataacccagatgaaagggcacttacaatgggtgatctaatctca
tttgcttggcaaatatccaggggaatgcagtatctagcagaaatgaagcttgtccatcga
gacttggcagcccgaaatgtgttggtcgcagaaggacgcaaaatgaaaatctccgatttt
ggtctttccagagatgtttatgaggaagattcctatgtaaagagaagcaagggtagaata
cctgtaaaatggatggctatagaatccctgtttgaccacatttatacaacacaaagtgat
gtgtggtcctttggagtgctcctgtgggagattgtaaccttgggaggaaatccatatccg
ggcattgctcctgagaggctctttaatctcctaaaaacaggttatagaatggagaaacca
gaaaactgcagtgatgaaatgtacaatcttatgcttaagtgctggaaacaggagcctgac
aagagaccaacatttggcgaaatcagtaaggaactagagaagatgatggtgaaaagcagg
gattatttagacttggctgcatccacacctgctgactccttgctgtatgatgatggcctt
tctgaagaggagacccctctggtggactgtaataatgccccacttcctcgaactctccct
tctacctggatagaaaacaaactctatggcatgtcctatccgaactggtctgaagaaagc
cccgttccaatcccgagattcgatgccaataagtctgttttttcaagatatgccaatgac
tgtgtttatgctaattggatgattccaccctcaacggcaaaatttatggagaagtttgat
agctaa
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