Xenopus tropicalis (tropical clawed frog): 100495962
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Entry
100495962 CDS
T01011
Name
(RefSeq) toll-like receptor 8
KO
K10170
toll-like receptor 8
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
100495962
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
xtr04054
]
100495962
04090 CD molecules [BR:
xtr04090
]
100495962
Pattern recognition receptors [BR:
xtr04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
100495962
CD molecules [BR:
xtr04090
]
Proteins
100495962
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
TIR
TIR_2
LRR_14
LRR_6
LRR_12
LRR_5
LRR_Zer-1
LRR_EndoS
LRR_NXF1-5
LRR_At5g56370
LRR_9
Motif
Other DBs
NCBI-GeneID:
100495962
NCBI-ProteinID:
XP_004912402
UniProt:
A0A8J0QZ76
LinkDB
All DBs
Position
2:complement(106030670..106041028)
Genome browser
AA seq
1055 aa
AA seq
DB search
MDVRIIGEGEEGKAKMTGSLQTLVLVVLITCNSLECSDTNPNNRTIPCKIAENGSSVSFD
CSARWLQMVPYPIKYSSDSVELLLSQNLILTINNESFHSWHNLTKIDLNWNHYPKSRLDN
ADICKRGLEIENGTFSYLTKLEKLFIDHNYLCKIPQGIPSTLTFLSLSYNNIFSVKKQIL
SPLINLKNLFLSNNCYFGNECGQVLDIEEGTFSGLTELTELSLSFNNLTHVPSKLPASLK
QLYLSNNNIQIINRNDFHNLVNLEVLYLSGNCPRCFNANYPCKNLCPNTSITIDHFAFQN
LKNLTELHLSSTSLKTIPPTWFQNTTQLKKLYLERNYLVNEIASADFLLNLPFLEVLDLS
FNYDLRSYTNNINISDHFSKLVSLKELHIQGYVFKHIAANNLAPLLNLSKLKILNLGTNF
IRQVDFKIFQQFTGLELIYLSENRITPFSEKNNKMKLVEGYEDKHSRVSSPGVSFPTQFN
FQMTKTFSEVVKPQCSSRGKTLDLSLNSIFFIDPKEFRSFSDVSCLNLSSNGIGQDLNGT
EFIYLKNLTYLDLSFNKLDFDSINAFQELPSLEVLDLSYNSHYFIVDGVIHSLKFIENLQ
HLKVLNLSWNKISTLTDFRLTSHSLKELQFSGNRLDVLWKNEDKRYHKLFMNLSSLTCLD
ISYNRLSKIKGELRYLPLSLTELYLNSNELVYFGWEELQAYENLKYLDLSHNKLTMIMGN
LSIHTYSLSSLIISYNSISSLPVAFLHKARNLSELDLSFNHLKSINSSVLLSGSENYLKV
LGLKGNPFVCTCEITDFISWIYANNVTIPRLATDVNCATPENKKGSGIIYFDVHTCDLDG
AAMILYFFSVFLVMSITVLPILINVFSWDLWYVYHLCVAKLRLHKVCKSECLYDVFITYD
NKDPNVNDWIFNELCQHLEDKGDKHMYLCLEERDWEPGKAIIDNLAHSINQSKKTLFVLT
KKYVKSGKFKIAFYLALQKLMDENMDVIVIVLLEPVLQNSQYLKLRRKICKSSIMEWPKN
PNAKGLFWQRMKNVLLTDNCKRYNNFYTDPIENYE
NT seq
3168 nt
NT seq
+upstream
nt +downstream
nt
atggatgttaggataatcggggaaggagaagaaggaaaggccaaaatgacaggctcactt
cagactcttgtattggttgtactgatcacctgcaattctcttgagtgttctgataccaat
ccaaataacaggaccattccttgcaaaattgcagaaaatggctcttcagtcagttttgat
tgcagtgcacgttggttacaaatggttccttatcccataaaatattcttctgattctgtg
gagcttctgctgtctcaaaacctcatactgacaataaacaatgaatcgttccacagctgg
cataaccttacaaaaatagacttaaactggaatcactatccaaagtccagacttgacaat
gcagatatatgtaagcgagggttagaaatagaaaatggaactttttcttacctaacaaaa
ctcgaaaaattatttattgaccacaattatttatgcaaaattccccaaggaattcctagt
actttaacatttttaagtttaagttacaataatattttctcagttaagaaacaaatccta
tcccctctcataaacctgaaaaaccttttcctgagtaataattgttactttggcaatgaa
tgtggacaagttttagacatagaagaaggtacattttcagggcttacagaattaactgaa
ctatctctatcatttaacaacttgacccatgttccttctaaactaccagcatctctgaag
caactttacttaagtaataacaatatacagattattaatagaaatgattttcataacctt
gtcaatttagaagttctttacttaagtggcaactgcccacggtgttttaacgcaaattat
ccatgcaaaaacctatgtccgaacacttctattaccatagatcatttcgcttttcaaaat
ctcaaaaatttgactgagcttcatcttagcagcacttccctaaaaacaataccacccaca
tggtttcaaaacacaactcagctgaaaaaattgtatcttgaaagaaattacttagtaaac
gaaattgcatctgcagactttttacttaatttgccatttttagaagtacttgacttgtct
tttaattatgatttgcgatcttatacaaataacataaacatatcagatcacttttccaag
ttagtatcccttaaggagctgcatatacaaggatatgtctttaaacatattgctgccaat
aatttagcccccctcttgaatctttctaaattaaagatattaaatcttggaacaaacttt
atcaggcaggttgattttaaaatttttcaacaatttacaggattagaattgatctatttg
tctgagaacagaataacaccattttcagaaaaaaacaataaaatgaaattggttgaagga
tatgaggataaacattctagggtttcatctccaggtgtcagtttcccaacacaatttaat
tttcaaatgaccaagaccttcagtgaggtagtaaaaccccagtgtagttcacgtggtaaa
acgttagatctcagcctaaacagtatcttttttattgatcctaaagaattccgttcattt
tcagatgtatcatgtttgaatttgtcttccaatggcattggccaagatttaaatggaact
gaatttatctacttgaaaaacttaacatatttagatttatcatttaataaacttgatttt
gattctataaatgcatttcaggaattgccttctttagaagtgctagatttgagctataat
agccattatttcatagtggatggtgtgattcattctcttaaatttattgaaaatcttcaa
caccttaaagttttgaatttaagttggaacaaaatatcaacactaactgacttccggcta
acaagtcacagtttgaaagaattacaattttcaggaaaccgcttggatgtattgtggaaa
aatgaggacaagcgttatcacaagctttttatgaatctttctagcctaacatgccttgat
atttcttacaacaggcttagcaaaatcaagggagaactgagatacttgcccttaagcctt
actgaactgtatctaaacagtaatgagctggtttattttggatgggaagaactgcaagca
tatgagaatctgaagtatcttgacttaagtcacaacaagttaacaatgattatgggaaac
ctttccattcacacatactcactgagcagccttataattagctacaacagtatttcaagt
ttgcctgttgcatttctgcataaagccagaaatctctcagaactagatttaagtttcaat
catttaaagagtatcaacagttcagttttattgtctggctctgagaactatttgaaagtg
ttgggactgaaaggaaacccatttgtttgcacatgtgaaattactgattttataagctgg
atctatgcaaataatgtcacaattccgcgactggctactgatgtcaattgtgccactcct
gaaaataagaaaggaagtggtatcatatattttgatgtacatacatgtgatttagatggc
gctgcaatgatactatactttttctcagtctttttggtaatgagtataactgttttacca
attttgataaatgtgttttcctgggatctctggtatgtttatcatttatgtgtggctaag
ctgagattgcacaaagtctgtaaatcagaatgcctctatgatgtatttataacatatgac
aacaaggacccaaatgtgaatgactggatcttcaatgaactatgtcagcacttggaggac
aagggagacaaacacatgtatctctgcttagaggaaagagattgggaaccaggaaaagcc
atcattgataatcttgcacacagcattaatcagagtaaaaagacattatttgtccttaca
aaaaaatatgtaaaaagtggaaaattcaaaattgcattttatttagccttgcaaaaactc
atggatgagaacatggatgtgattgtaattgttctactagaacctgtgttacagaattcc
cagtatttaaaacttagaagaaaaatatgcaagagctcgataatggaatggcccaaaaat
ccaaatgcaaaaggcttattttggcaaaggatgaaaaatgttcttctaacagacaattgc
aagagatacaataatttttacactgatcctatagaaaattatgagtga
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