Xenopus tropicalis (tropical clawed frog): 100497170
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Entry
100497170 CDS
T01011
Symbol
clrn1
Name
(RefSeq) clarin-1
KO
K23841
clarin
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
xtr03037
]
100497170 (clrn1)
Cilium and associated proteins [BR:
xtr03037
]
Primary cilia and associated proteins
USH complex and associated proteins
100497170 (clrn1)
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GFIT
Motif
Pfam:
Clarin-2
DUF624
PsbN
Motif
Other DBs
NCBI-GeneID:
100497170
NCBI-ProteinID:
XP_002937147
Xenbase:
XB-GENE-6044813
UniProt:
F6XD29
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Position
5:118238867..118250995
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AA seq
232 aa
AA seq
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MPKLQKKILFCLAGVLSFACALSIAAALGKQLWVKGTILCKTAALLVNATEGELHQFVGE
IQYGLFFGQRVKQCGLGGRPTTFSFFPDLLNVIPASMHVSVIIFSTALIVFALVGTGFFM
FNAFGNPFETLHGPVGLYLWCFVSCSCGCLVLILFSSEVKMHHLSEKIANYKEGSFVFKT
HSEQFQTSYWIILVCTLVHIVNVFLIRVAGFDFPFAKSKDLETSSGANDLMY
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atgccaaagttacagaagaaaatcttgttttgcctggctggtgtgttaagctttgcctgt
gctctcagcattgcagcagctctagggaagcagctctgggtcaaagggacaatcctgtgt
aaaactgcagccttgctggtcaatgcaacggagggagagctgcatcaatttgttggggaa
attcagtatggccttttctttggacaaagagtgaagcaatgtgggctcggggggagaccc
actacattttcattttttccagatttgctgaatgtcattcctgccagcatgcacgtcagc
gtgatcatattctccacagcactcattgtatttgccctggtgggaacaggctttttcatg
ttcaatgcctttggtaatccattcgagaccttgcatggcccagttggactttatctttgg
tgctttgtttcatgttcctgtggctgtcttgtgttaatcctcttctcttccgaagtgaaa
atgcaccatttatcagaaaaaattgctaattacaaagaaggaagctttgtctttaaaacc
cacagtgaacaatttcaaacctcttactggattatcctggtttgcacccttgtgcacatt
gtcaatgtattcctcattcgggttgcaggtttcgatttcccatttgcaaagtcgaaagat
ctggagacaagttctggggcaaatgatctaatgtactga
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