Xenopus tropicalis (tropical clawed frog): 100497690
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Entry
100497690 CDS
T01011
Symbol
rapgef4
Name
(RefSeq) rap guanine nucleotide exchange factor 4 isoform X2
KO
K04351
Rap guanine nucleotide exchange factor 4
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04081
Hormone signaling
xtr04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
100497690 (rapgef4)
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
100497690 (rapgef4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xtr04131
]
100497690 (rapgef4)
Membrane trafficking [BR:
xtr04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
100497690 (rapgef4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RasGEF
cNMP_binding
DEP
RasGEF_N
RA_2
Motif
Other DBs
NCBI-GeneID:
100497690
NCBI-ProteinID:
XP_002934663
Xenbase:
XB-GENE-6048644
UniProt:
A0A8J0QK13
LinkDB
All DBs
Position
9:complement(66962845..67126549)
Genome browser
AA seq
1024 aa
AA seq
DB search
MVAAHTAHSTSSAEWIACLDKRPLERSGEDVDIIFARLKEVKAFERFHPNLLQQICFCGY
YENLEKGITLYRQGDIGTSWYAVLTGSLDVKVSETNNHQDAVVICTLGVGTAFGESILDN
TPRHATIVTRENSELLRIEQKDFKTLWEKYRQYMAGFLAPPYGVLETGSNDRLSDKENMN
SALGPGSKNCNKTPLIENQIPIRPAKTITEVPSERILRAGKTLRNAILTRAPHMIRDRKY
HLKTYRQCCVGTELVDWLMQQSSCVHSRTQAVGMWQVLLEDGVLNHVDQEYYFQDKYLFY
RFLDDEHEDAPMPTEEEKKESDEELQDTLLLLSQIGPDAHMRMILRKPPGQRSADDLEII
FEELIHIKALSHLSTTVKRELAGFLIFESHPKAGTVLFNQGEEGTSWYIILKGSVNVVIY
GKGVVCTLHEGDDFGKLALVNDAPRAASIVLREDNCHFLRVDKEDFNRILRDVEANTVRL
KEHDQDVLVLEKILAGSQGSAQGNTQSPYKYTVMSGNPEKLLEHFLETMRLDPSLNDATD
TALDDFILMHCVFMPNSQLCPALMSHYHAQPSQGTEQEKLDYTLNNKRRVIRLVQQWATL
YGDLLREDEVSMAFLEEFYVSVSDDTRTTAALKEQLPDLERAIKQISEDAKGQQKKHKVL
LRQFSTGDERLQKRQAIRSSDELLFKVYCIDHTYTTIRVAVAASVKEVLSAVADKLGSGD
SLILVKISSAGEKVVLKPNEISVFTTLSVNGRLFACPRDQFDSLTPLPEQEGPSAGTMST
FELMSSKDLAYQMTIHDWDLFSCVHELELIYHTFGRQNFKKTTANLDLFLRRFNEIQFWV
VTEICLCPQLSKRVQLLKKFIKIAAHCKEYKNLNSFFAIVMGLSNVAVSRLSLTWEKLPS
KFKKIYAEFENLMDPSRNHRAYRLTVAKLDPPIIPFTPLLIKDMTFTHEGNKTFIDNLVN
FEKMRMIANTLRTIRYCRSVPFNPDASLAGKNHQDVRNYVRQFNVIDNQRTLSQMSHRLE
PRRA
NT seq
3075 nt
NT seq
+upstream
nt +downstream
nt
atggtggctgcacacactgcccattctacctcctctgctgaatggattgcctgcttagat
aaaaggcccctggagcgttcgggagaagatgtggacattatatttgcacgactgaaagaa
gttaaagcttttgagcgatttcacccaaatctccttcagcagatctgcttttgtggatac
tatgaaaacctggaaaaggggattacgttgtaccgtcaaggtgatataggaacaagttgg
tatgctgtgctaacaggatcactggatgttaaagtatctgaaactaataaccaccaggat
gcagtcgtcatttgcactttgggggtgggaacggcttttggcgaatccatattggacaat
acccctcggcatgccaccatcgtcacaagggaaaatagcgaactccttcgcattgagcag
aaggattttaaaaccctttgggagaaatatcggcagtatatggctggcttcctggctcca
ccctacggtgttctggaaaccggatctaatgacaggctctcagacaaagaaaatatgaat
agcgctctgggaccaggatccaaaaactgtaataagaccccactcattgaaaatcaaatc
ccgatacgtccagctaaaaccattacagaggttccatcagaaagaatactcagggctgga
aagactttgcgtaatgccatccttactcgggcgccccacatgattagggatcgaaagtat
catctgaaaacatacaggcagtgctgtgtgggaactgaacttgttgactggcttatgcag
caaagctcatgcgttcattctcggacgcaagcagtgggaatgtggcaggtgttgctcgaa
gatggagtcctaaaccatgtggaccaggaatattacttccaagacaaatacctgttttat
cggtttcttgacgatgaacacgaggatgcaccgatgccaacagaggaggagaagaaagag
agcgacgaggagctgcaggatacgttgctcttactctcgcagataggacccgatgcacac
atgagaatgattctgagaaaaccaccgggtcagaggagtgcagatgacttagaaattatt
tttgaagaacttattcacattaaagccttatctcacttatcaacaacagtgaaaagagaa
cttgctggattcctaatctttgaatctcatcccaaagcaggaactgtgttatttaaccaa
ggagaagagggcacttcctggtacatcatcttgaaaggatctgtcaatgttgtcatctat
ggaaagggagttgtttgtaccctgcatgagggagatgactttgggaagcttgcccttgtt
aacgacgccccaagggcagcatccattgttttacgagaagacaattgtcacttcctgcgt
gtggacaaggaggacttcaaccggatcctgcgtgacgtggaggccaacacagtgagactc
aaggagcacgatcaagatgtcttggtactagaaaaaatcctggctggatctcaaggctca
gcacaagggaacactcagtcgccatataaatacactgtgatgtcaggaaacccagagaaa
cttctagaacacttcctggaaacaatgcgccttgatccgagtttaaatgatgcaacagac
accgctttggacgactttattctgatgcactgtgtttttatgccaaattctcagctctgc
ccggccttgatgtcacattaccatgcgcagccttcccagggaacggagcaggagaagctg
gattacaccctgaataacaagcgcagggtcatacggctggttcagcagtgggccactctg
tatggggacctgctccgtgaggatgaggtttcaatggcctttcttgaagaattttatgtg
tcggtatcagatgacacaagaacgactgcagccctgaaggagcagctacctgacctagaa
cgagccatcaagcaaatatctgaggatgcaaaggggcaacaaaagaagcacaaggtgctt
ttacggcaattcagcactggagatgagagactgcaaaagcgccaggcaatacggagttcc
gatgaacttctgttcaaggtatactgcatagaccatacgtacaccactatccgtgtcgct
gtggctgcttcagtgaaagaagtgctctctgcggtcgccgataaactaggctccggggac
agcttgatactcgtcaaaatcagttctgcaggagaaaaagtggtgctgaaaccaaatgaa
atatccgtctttacaacgctcagcgtgaatggacgtctgtttgcctgcccccgggaccag
ttcgattctttgacccctctaccagaacaagaggggccttccgctggaaccatgtcaact
tttgaactcatgagctctaaagacttggcgtatcagatgaccattcatgactgggaccta
ttcagttgtgtgcatgagctggaacttatttaccacacattcgggcgacagaatttcaaa
aagacgacggcaaatttggacctcttcctgagacgttttaatgaaattcagttctgggtt
gtgactgagatttgcctgtgccctcaactcagcaagcgcgttcaacttctaaagaaattt
attaaaattgcggcccactgcaaggaatataaaaatttgaactcgttctttgctattgtc
atggggctgagtaacgtggccgtaagccgtctctcactgacatgggagaaactcccaagc
aagttcaaaaagatctatgcagaatttgaaaatttaatggatccatcaaggaatcacagg
gcttacaggctcactgtagctaaactggaccctccaatcattccatttacacctctgctt
atcaaagatatgacttttacccatgagggcaacaaaaccttcattgacaatttggttaac
tttgagaaaatgcgaatgatcgcaaacaccttgagaacaataagatactgccgaagcgtc
cctttcaatcctgatgcctctcttgccggcaaaaatcaccaagacgtgcggaattatgtg
cgccagttcaacgtgattgacaaccagaggacactgtctcagatgtcccaccggctggaa
ccacgccgagcctaa
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integrated database retrieval system
