Xenopus tropicalis (tropical clawed frog): 100498216
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Entry
100498216 CDS
T01011
Symbol
traf3
Name
(RefSeq) TNF receptor-associated factor 3 isoform X1
KO
K03174
TNF receptor-associated factor 3
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04620
Toll-like receptor signaling pathway
xtr04621
NOD-like receptor signaling pathway
xtr04622
RIG-I-like receptor signaling pathway
xtr05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
100498216 (traf3)
04621 NOD-like receptor signaling pathway
100498216 (traf3)
04622 RIG-I-like receptor signaling pathway
100498216 (traf3)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
100498216 (traf3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
zf-TRAF
TRAF3_RING
ATG16
zf-C3HC4
Sina_ZnF
zf-C3HC4_2
ADIP
zf-RING_4
DUF3450
GAS
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
100498216
NCBI-ProteinID:
XP_002938036
Xenbase:
XB-GENE-968262
UniProt:
F7A6L4
LinkDB
All DBs
Position
8:97750383..97839329
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AA seq
569 aa
AA seq
DB search
MHKPSCYIMDTGKKTDPSASVQKANPDRSLATTIYVPEQGGYKERFLKPVEEKYKCEKCR
LVLCNPRQTECGHRFCETCMNAILSSTSPQCMACEDNITKDKVFKDNCCRREVLALQMFC
RNETRGCKELITLGNLLIHLKSDCQFEELSCPRADCKEKVIRKDLSDHIEKTCKYRETPC
KFCRNQVPLVEMQKHEDVDCPSVVISCPHMCSVKSLLRSELNAHLLECVNAPSTCSFKRY
GCTFKGTNQQIKAHEASSAVQHVNLMKEWSNYLEAKVSMLQNESSEKNKSIQILHNQMCS
FEIEIERHKEQLRNNEARIIQLQRVIEGQADKLKDLDKEIRNLRQTGDEADGMKSNYESL
QNRLSQLEVMAKNAASWNPGVLETQINRHDQMLSVHDIRLADMDLRFQVLETASYNGVLI
WKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMR
GEYDALLPWPFKQKVSLMLMDQGPSRRHLGDAFKPDPNSSSFKKPTGEMNIASGCPVFVA
QTVLENGTYIKDDTIFIKVIVDTSDLPDP
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgcacaaacctagctgctatatcatggatactggcaaaaagaccgatccatctgcatct
gtgcaaaaagccaacccagatcgcagccttgctacaactatctatgtgccagaacaagga
ggatacaaggaaaggtttctaaaacctgtagaggagaaatacaaatgtgaaaaatgccgc
ttggtgctgtgtaaccccagacagacagaatgtggccacagattttgtgaaacatgcatg
aacgcaatactaagttcgactagcccacaatgcatggcctgtgaagataacatcactaaa
gataaggtgttcaaggataactgctgcaggagggaagtcctggcccttcagatgttctgc
agaaatgaaaccagaggttgtaaagaactcatcacactaggaaatctcttgatacaccta
aaaagtgactgccaatttgaggaactttcttgtcctcgcgctgactgtaaagaaaaagtc
attagaaaggacttaagcgaccacatagaaaagacatgtaaatacagagaaactccgtgt
aaattctgtagaaaccaggtcccattggtagaaatgcagaaacatgaagatgtggattgt
ccgtctgttgtaatatcttgccctcatatgtgtagtgtgaaaagccttttgcggagtgag
ttgaatgcgcatttgttagaatgtgttaatgccccaagtacctgtagtttcaaacgttat
gggtgcacttttaagggaacaaaccaacagattaaagcacatgaggctagctcagctgtt
cagcatgtgaatctgatgaaggaatggagtaactatctggaagcaaaggtgtccatgtta
caaaacgaaagctctgaaaagaataaaagtattcagatattacacaaccagatgtgtagc
ttcgaaattgaaatagagcgacacaaggagcagctgcgaaataatgaagcaaggattata
caacttcagagagtgatagaggggcaagcagataagctaaaggatttagacaaggaaatt
cgaaatctgcgccaaactggcgatgaagctgatggcatgaagagcaattacgaatcttta
caaaatcgtctgtcacagttagaagttatggccaaaaatgcagcatcttggaatccaggt
gttttagagacacagatcaacagacatgaccagatgctcagtgtccatgatatcaggttg
gcggacatggatcttagattccaagtgctagaaacagcaagttacaatggggtactgatc
tggaaaataagagactacaaaagaaggaagcaagaggctgtgatggggaagaccctctca
ttgtacagccagcctttttacacaggatattttggctacaagatgtgtgcaagagtttat
ctaaacggcgatgggatgggaaaagggacgcatttatcactattttttgttatcatgaga
ggagaatatgatgctttgcttccttggccttttaaacagaaagtcagcctcatgttaatg
gaccaaggaccatcacgacgtcatttaggagatgcattcaaaccagacccaaacagcagt
agcttcaaaaaacctactggagaaatgaacattgcttctggctgcccagtgtttgtagcc
caaacagtcctggagaatgggacgtacattaaagatgatactatttttattaaagtgata
gtagatacatccgatctaccagatccttga
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