Xenopus tropicalis (tropical clawed frog): 100498653
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Entry
100498653 CDS
T01011
Symbol
gli2
Name
(RefSeq) zinc finger protein GLI2
KO
K16798
zinc finger protein GLI2
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
100498653 (gli2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xtr03000
]
100498653 (gli2)
Transcription factors [BR:
xtr03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
100498653 (gli2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_15
zf-C2H2
zf-H2C2_2
FOXP-CC
Zap1_zf1
zf-C2H2_4
zf_C2H2_ZNF292
Motif
Other DBs
NCBI-GeneID:
100498653
NCBI-ProteinID:
XP_002943329
Xenbase:
XB-GENE-481810
UniProt:
A0A6I8RCT3
LinkDB
All DBs
Position
9:89202796..89284610
Genome browser
AA seq
1474 aa
AA seq
DB search
MENSGPVSTAHKKEAKNSLLDGNGFPDPGKKLGGLSTSHGAPAPLFPAFHPPFPVEVRHQ
EGRYHYDAHSIHALHGPPTLSGSPVISDISLIRLSPHSLGTAEFGHAHHYVSPHMEHYLR
SVHGSPTLSMISAARGLSPAEVAHEHLKERGIFGLAPPGTAPTEYCHQMAILASHASPYG
ELLVQSAAAAAGNTAHLHEYLTPMDVSRFSSPRVTPRLSRKRALSISPLSDASIDLQTMI
RTSPNSLVAYINNSRSSSAASGSYGHLSAGAISPAFSFPHPINPVAYQQLLSQQRSLTSS
FGHAPLLHPSPTFAPRQQGALTSANPAPPSNNSSTPDSVLNKGSSESAVSSTVNQVIPKR
SKVKMEDEGLQRDSPSPPDHLTDLKEDLDKDECKQEPDVIYETNCHWDGCSHEFDTQDQL
VHHINNDHIHGEKKEFVCRWHDCSREQKPFKAQYMLVVHMRRHTGEKPHKCTFEGCYKAY
SRLENLKTHLRSHTGEKPYVCEHEGCNKAFSNASDRAKHQNRTHSNEKPYICKIPGCTKR
YTDPSSLRKHVKTVHGPEAHVTKKHRNDIIQKPSVTKENGDNEASAKLSGREHPNSAPRE
REDCLQARSIKTEDNMMHQSSPGGQSSCSSEPSPYGIDSGVDVSLHGEGGLGELFGLEET
SPVVDSTVSSGGAGIGLQLRKHGGTAVQRLEQLKKEKLKTVKDSCSFMNPAPPVRNTRLP
TISANGPSLDALGVPSNVLLGGRAAELSMNEVTVLNHLNERRDSTGSTVSSAYTSRRSSG
ISPYFSSRRSSETSQFGGRLNNSSSADSYDPISTDASRRSSEASQHSGLPNLLNLTPAQQ
YRLKAKYAAATGGPPPTPLPNMDRISLRNKLSLMDGTDFPLPPFRQLPLPRRCSDGDANP
GLAAFPHEILGNNSRRASDPVRRIGGPEGQALPRVQRFHSMNSMNSLHPPALLERRNGGL
QHYTRSDGSLHRHLYSPRPPSITENVAMEAMSCDADVPAGDDDLMLPDDVVQYLRAQNRE
APEQNLPEYNGLGRNLQSNMKPFHHNPPEQHRAPGPYSGRNFPTLAQCLGQTANLQENHL
PVQWNEVSSGTVDAGDLPKQPLAPGNLAVVQQKQNFAQYQNFTPAPAQGPPNIMGQESVQ
RNFSLNGQRFNYMQQRQPQLRQCQNVGSDLGPQQSYSQNQSMLSPRAMQDGQSQHSPSCN
NMAERPGVPTHSAPSNTLSHQHLAARAAPTQGFANNFPINQDGLRPPNAYTVPTQQNGLE
PQQNTLGMSGQPFNHGMIQPRPPAAPHPPNRPRNIHPGHQPSYMRSPHPVGDLSPAQQTA
EATPKRPSEEADPSPKDNALLYYSAQIHMFEPNGTFSPGIDCTARQLPTLPSPGANQVTS
TVDSQGLEQPPVIDFDAMMDDGDHSSLMSGTLSPGLLQSFSQTSSRLTTPRNSLTLPSIP
AGIGNMAIGDMSSMLTTLAEESKFLNLMPQTLGL
NT seq
4425 nt
NT seq
+upstream
nt +downstream
nt
atggagaattccggcccagtcagcaccgcgcacaagaaggaggccaagaattcccttctg
gatggaaatggattcccagatccggggaagaagttggggggcctgagcacttcgcatggg
gctccggctcctctcttcccggccttccacccccccttcccggttgaagtgcgccaccag
gagggcaggtaccattacgacgcccacagcattcacgctctccatggccccccaactctc
agcggtagccccgtgatctcagacatctccttaatccgcctctccccccactcgctgggt
accgccgagtttggccacgcccaccactatgtcagcccccacatggagcattacctgcgc
tccgtgcacggcagccccaccctgtctatgatctcggccgcccgagggctcagcccagca
gaagtggcccatgagcacttaaaagaaaggggcatctttggcttagcgccccctggtacc
gcccccacagaatactgccaccaaatggccatcttggccagtcacgccagtccgtacggg
gagctgctggtacagagcgcggcggcggcggcggggaacacggcgcatctacacgagtac
ctcacccccatggatgtatccagattctccagcccccgagtgacaccgagactaagccgg
aaaagggccctttccatctcccccctgtcggacgccagcattgacctacagaccatgatc
cgcacgtcccccaactccctggtcgcctacatcaacaactcccggagcagctcggccgcc
agcggatcctatgggcacctctctgcgggggcaataagcccggcgtttagcttcccgcac
cccataaaccctgtagcctatcagcagctcctgagccagcagcgcagcctgacttcctcg
tttggacacgcccctttgctccacccatcgccgacatttgcgccccgccagcagggggca
ctcacatcagccaatccagctcctccgagcaacaacagctccacccctgactccgtcctg
aacaaggggagcagcgagtcggcggtgagcagtaccgtcaatcaggtgattcccaagcgc
agcaaagtcaagatggaagacgaggggcttcagcgcgactcccccagccctccggaccac
ctgaccgacctgaaggaggatctggataaggacgagtgcaagcaggagcccgacgttata
tacgagaccaactgccactgggacggctgcagccatgagttcgatacccaggaccagctg
gtccatcatatcaataacgaccacatccacggggagaagaaggagtttgtgtgtcgctgg
cacgactgttcccgggagcagaaacccttcaaggcgcagtacatgctggtggttcatatg
agacgccacacgggggagaaaccgcacaaatgcacctttgagggctgttacaaggcctat
tcccggctggagaacctgaagacgcacttgcgctcgcacacgggggagaagccgtacgtc
tgtgagcacgagggctgcaataaggccttttccaacgcgtccgaccgagccaaacaccag
aaccgaacccattccaacgagaaaccctacatctgtaagatcccggggtgcacaaagcgc
tacacggaccccagctctctcaggaaacacgttaaaacggtacatggaccggaggcccat
gtgaccaagaagcaccgcaatgacatcatccaaaaaccttccgtaaccaaggagaacggg
gacaacgaggcgagcgccaagctgagcggcagggagcaccccaacagcgcccccagggag
cgggaggactgcctgcaggccaggagcatcaaaaccgaagacaacatgatgcaccagtcc
agccccggcgggcagtcgtcctgcagcagtgagccgtccccctatggcattgacagtgga
gtagacgtgagcctgcacggcgaggggggcctgggagagctgtttggattggaggagacc
agcccggttgtagactccacggtgtcgtccggcggcgcagggatcggcctgcaactgcgc
aaacatggcggaaccgcggtgcagagactggagcagctgaagaaagagaaactgaaaacg
gtgaaagattcctgttcattcatgaacccggcgccgccagtcaggaacacccggctgcca
accatcagcgcaaacggtccgtcactcgatgccctcggtgtccccagcaatgtgctcctc
ggcggccgggcagcggaactgtccatgaatgaggtgacggtgctgaaccacctgaatgag
cggcgcgacagcaccggcagcaccgtaagctccgcctacaccagccgccggtcctccggc
atctccccctacttctccagtcgccgctcgagcgaaacctcgcagtttgggggccgcctg
aataattccagctcggcggattcttacgaccccatttccaccgatgcgtcgaggcgctcc
agcgaggctagccagcacagcggccttccaaacctgctcaacctcacccccgcccagcag
taccgattaaaggccaagtatgccgcggccaccggcggcccgccccccactcctcttccc
aacatggacaggataagtctgaggaacaagttgtccctgatggatggaacagactttccg
ttgcctccgttccggcagctccccctcccgagacgttgcagcgatggggatgcaaacccg
gggctcgccgccttcccccatgaaattctggggaataactccaggcgggctagtgacccg
gtcagaaggattggggggccggagggccaagctctcccaagggtccagcgcttccatagc
atgaacagtatgaactcgttgcaccccccggccctactggagcggagaaacgggggcctg
cagcactacacccgctccgacggcagcctccacaggcacctctattccccccggcccccc
agcatcactgaaaatgtggccatggaggccatgtcctgtgacgccgatgtccccgctggg
gacgatgacctcatgctccctgatgatgtcgttcagtacctcagagctcagaaccgggag
gccccggagcagaacctgcctgagtacaacggtctgggccggaatctgcaaagcaacatg
aaaccgttccatcacaacccaccggaacaacaccgggcccccgggccctactccggcagg
aacttccctacattggcccaatgcctcggccagacggctaacctgcaggagaaccacttg
ccagtccagtggaatgaagtcagctcgggcacggttgatgccggggatctacccaagcag
ccgcttgccccaggcaacttagcggttgtccagcagaagcagaactttgcccagtaccag
aacttcaccccagcgcctgcccaggggccccccaatattatgggccaggagtcggtacag
aggaatttcagtcttaacggacagaggtttaattatatgcaacaaagacaaccgcagttg
cgccagtgccaaaatgtcggttctgacttgggcccccaacagagctacagccagaaccaa
tcaatgctgagcccgagagcaatgcaggacggccagagccagcattctccatcctgtaac
aacatggcggagaggcccggcgttcccacgcattcggcgccaagcaacacactgagtcac
cagcacctcgctgcgcgcgcagcacccacgcagggcttcgcaaataacttccccattaac
caagacggactccgcccccccaacgcctacacagtcccgactcagcagaatgggttggag
ccacaacagaacactctcggaatgtctgggcagccgttcaaccacggaatgatccagcca
agacccccagctgccccacacccccctaaccgacccaggaacatccacccgggacatcag
ccttcctacatgcggagtccgcaccctgtcggggatctgagcccggcccaacaaacggca
gaggcaacaccaaaaagacccagcgaggaggcagatccgagccccaaagacaacgctttg
ctttattattccgcgcagattcacatgttcgagccaaatggaaccttcagccctggcata
gactgcacggcccggcaactgcccaccctgccctctccgggggcaaatcaggtcacgagc
accgtagactcccaaggtctggaacaaccccccgttatagattttgacgccatgatggac
gacggggatcactcgagtctcatgtcaggaaccttgagccccggcctcttgcagagcttc
tcccagacctcctcccgccttacaactcccaggaactccctgacgctcccctccatcccc
gccgggataggcaacatggccataggagacatgagctccatgctcactaccctggcggag
gagagcaagtttctcaacctgatgccccagacattagggctctga
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