Xenopus tropicalis (tropical clawed frog): 108644489
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Entry
108644489 CDS
T01011
Name
(RefSeq) F-box/WD repeat-containing protein 7 isoform X1
KO
K10260
F-box and WD-40 domain protein 7
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
108644489
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xtr04131
]
108644489
04121 Ubiquitin system [BR:
xtr04121
]
108644489
Membrane trafficking [BR:
xtr04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
108644489
Ubiquitin system [BR:
xtr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
108644489
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_IFT122_1st
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40
F-box-like
Beta-prop_TEP1_2nd
Beta-prop_SCAP
EIF3I
WD40_Gbeta
Beta-prop_WDR75_1st
WDR55
F-box
Beta-prop_TEP1_C
Beta-prop_WDR41
Beta-prop_WDR36-Utp21_1st
DSE1_N
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML_2
ANAPC4_WD40
WDR90_beta-prop_4th
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
ASA1
PALB2_WD40
Beta-prop_VPS8
Beta-prop_DCAF4
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_NOL10_N
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
Beta-prop_NWD2_C
F-box_4
Beta-prop_RIG_1st
Beta-prop_Vps41
WD40_like
Motif
Other DBs
NCBI-GeneID:
108644489
NCBI-ProteinID:
XP_017945065
UniProt:
A0A8J0SZV3
A0A1B8Y7M2
LinkDB
All DBs
Position
4:complement(2420771..2429421)
Genome browser
AA seq
459 aa
AA seq
DB search
MGCARQSRMEAGEPQDCTSWLPDELALRILSYLDAKDILQVAQTCQRWRELAEDEGLWQG
KCKADGIEEPLHISTATGSRPRPWKSTYTNQLRVDTNWHRGRFRTITLDLLRDYLDLHRV
GFNGKELVCTIHYEIIKVWSAVTGECPRTLVGDRASVTAVQMRDHMIVSGYEDGTVKVWN
AESGECIHTLGGHTSHIHNVHLHEQRAASCSSDRTIRVWDIEAGQCLHTLLGHEASVMWV
WYNGRRLVSEDLCHIVKMWDPETETCLRSVCLHSGAFITFVQFDGKHIVSLLCPGRTIGV
WDGATLERTRTITGNEPYTTLMTLKNSILGVVNSGRAAEIWNVETGQRLNLLQDPDGFDP
YAHDLALRGDFLIGRTGTGRVTLWDWRTGQFLQNLFVPKREETLAPHLLVSNTKLVFSVA
SKWGALAYWPHKVLVLDFDVKERAKKKNPFSVLSWVIPS
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgggttgtgccaggcagagcagaatggaagccggggagccccaggactgtacctcctgg
ttacctgatgagttggcattgcgcatcctctcgtaccttgatgccaaggatatcctgcag
gtggcgcagacttgccagcgctggagagagttggctgaggatgaaggcctgtggcaggga
aagtgcaaggctgatgggattgaggagccgctgcacataagcacagctacaggctctagg
ccccgcccatggaaaagcacttacaccaatcagctcagggtcgataccaactggcaccga
gggagattcagaacaatcacactggatttacttagggattatctcgacctacaccgtgtg
gggtttaatgggaaggaattggtttgtacaatacattatgaaataataaaggtctggtcg
gcagttacaggcgagtgtccaaggacccttgtgggagacagagctagtgtcacagcagtg
caaatgagagatcacatgattgttagtggatatgaggatggtacagtaaaagtatggaat
gcagagagcggggaatgtatccacacgctgggcggccatacttctcacatacacaatgtg
catctccatgagcaaagagcagcgagttgttcttcagatcgcaccatccgggtttgggac
attgaggcaggacagtgcttacacaccctattggggcacgaagcttctgtcatgtgggtt
tggtataatggccgaaggttggtgagtgaagatttgtgccatatagtgaaaatgtgggac
cctgagacagaaacctgtctgcgctctgtttgtctgcactccggtgcattcattacattt
gtacagtttgatgggaagcacatagtcagccttctatgcccgggcagaaccataggcgtt
tgggacggggcgacattagagcgcactcgcacaataactgggaatgagccctacacgact
ttgatgactctgaagaacagcattctgggagtggtaaatagcggccgcgctgctgaaata
tggaacgtcgaaacagggcagcgcttgaatctcctgcaggatcccgatggattcgaccca
tatgcccatgacttagctctccggggggatttcctcataggcaggactggcactgggagg
gtcacattgtgggactggagaacggggcaatttctgcagaatctgtttgttcctaagaga
gaagaaactcttgctcctcatttactcgtctctaacacaaagttagtcttttcggttgca
tcgaaatggggagcactggcatattggccacacaaggtgctggttctggactttgatgtg
aaggaacgggcaaaaaaaaaaaatccgttcagtgttctaagctgggtgatcccctcctaa
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