Xenopus tropicalis (tropical clawed frog): 448346
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Entry
448346 CDS
T01011
Symbol
acta1
Name
(RefSeq) actin, alpha skeletal muscle
KO
K12314
actin, alpha cardiac muscle
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04260
Cardiac muscle contraction
xtr04261
Adrenergic signaling in cardiomyocytes
xtr04814
Motor proteins
xtr04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
448346 (acta1)
04820 Cytoskeleton in muscle cells
448346 (acta1)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
448346 (acta1)
04261 Adrenergic signaling in cardiomyocytes
448346 (acta1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
xtr04812
]
448346 (acta1)
04147 Exosome [BR:
xtr04147
]
448346 (acta1)
Cytoskeleton proteins [BR:
xtr04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actins
Actins
448346 (acta1)
Exosome [BR:
xtr04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
448346 (acta1)
Exosomal proteins of bladder cancer cells
448346 (acta1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Actin
Motif
Other DBs
NCBI-GeneID:
448346
NCBI-ProteinID:
NP_001006709
Xenbase:
XB-GENE-491938
UniProt:
F6UH63
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Position
5:57884828..57891193
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AA seq
377 aa
AA seq
DB search
MCDDEETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA
QSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREK
MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRL
DLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEK
SYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNV
MSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIT
KQEYDEAGPSIVHRKCF
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgacgatgaagagactaccgcacttgtgtgtgacaatggctccggacttgtaaaa
gctgggttcgctggagatgatgctccaagagcagtgtttccatctattgttggacgcccc
cgccaccagggtgtcatggttggtatgggtcaaaaggactcctatgtaggtgatgaagca
cagagcaagagaggtattcttacactaaagtatccaattgaacatggtattatcactaac
tgggatgatatggagaagatttggcatcacaccttctacaatgaactgcgtgtagcccct
gaagagcatcccaccctgcttactgaggctccactgaaccctaaagctaaccgtgaaaag
atgactcaaataatgtttgagactttcaacgtcccagctatgtatgttgcaatccaggca
gtgctttctctatacgcctctggccgtacaactgggattgtgctcgactctggggatggt
gtgacacacaatgtaccaatttatgaagggtatgccttaccccatgccatcatgcgcctt
gatttggctggccgtgatcttactgactacttaatgaaaattctgacagaacgtggctac
tcttttgtcaccactgctgaacgtgaaattgttcgtgacatcaaggaaaaactctgttat
gtggctctggactttgagaatgaaatggccactgctgcctcctcatcttctctagaaaag
agctatgaactgcctgatggtcaagttataaccattggaaatgaacgtttccgttgccca
gagactctcttccaaccatcatttattggtatggaatctgctggtattcatgaaacaaca
tacaacagcattatgaagtgcgatattgacattagaaaggatctctatgctaataatgtg
atgtctggaggtaccaccatgtacccaggtattgctgaccgtatgcagaaggagattaca
gccctggctcccagcacaatgaaaatcaagatcattgctcctcctgagcgtaaatattct
gtctggattggtggatccattctggcttccctttcaactttccagcagatgtggattaca
aaacaagaatatgatgaagctggtccctctattgtccaccgtaaatgcttctaa
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integrated database retrieval system
