Xenopus tropicalis (tropical clawed frog): 448432
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Entry
448432 CDS
T01011
Symbol
tdg
Name
(RefSeq) G/T mismatch-specific thymine DNA glycosylase
KO
K20813
thymine-DNA glycosylase [EC:
3.2.2.29
]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
448432 (tdg)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xtr03400
]
448432 (tdg)
Enzymes [BR:
xtr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.29 thymine-DNA glycosylase
448432 (tdg)
DNA repair and recombination proteins [BR:
xtr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
448432 (tdg)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
GAGA_bind
Motif
Other DBs
NCBI-GeneID:
448432
NCBI-ProteinID:
NP_001004982
Xenbase:
XB-GENE-1006128
UniProt:
Q6DIK5
LinkDB
All DBs
Position
3:49812525..49825450
Genome browser
AA seq
441 aa
AA seq
DB search
MEAQDPSSYYLLQPTQAYYPFSYHQMMNVPSNMDLGNEQQTLHPLTGVPAHELQAFSGMA
ANEPQVLHTLTGVQAQEPINGEMQVPEMIPNLAEAEPTTGKRKRGKAPSEPKPKKQAAKS
AKAPKSSGKQEKITDTFKVKRKVDRFNGVSEAELMTKTLPDILTFNLDIVIIGINPGLMA
AYKGHHYPGPGNHFWKCLFLSGLSDMQLNHLDDHSLPEKYGIGFTNMVERTTPGSKDLSS
KEFREGGRILLEKLQKYKPRVAAFNGKCIYEIFSKEIFGVKIKKFEFGIQPHRVPETDTV
CYVMPSSSARCAQFPRAQDKVHHYIKLKELRNQLKGVESSREVQEVQYSFDLQLAQADAK
RQAIKEEKYDPGYNEATGEQFNEQTTSGESGMCNFSTDATVSSNPEFNGQGQNGQWIPQP
VAEQMSTYNHSGDQQQGGSNA
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atggaagcccaggacccaagcagttactacctgcttcaaccaacccaagcctattaccca
ttttcataccatcaaatgatgaatgtgccttcgaatatggatctaggaaatgagcagcag
actctgcatcctctaactggtgttccagcccatgagctgcaggctttctctgggatggct
gctaacgaacctcaagtgctccataccctcactggagtgcaagcccaggaacctataaat
ggagagatgcaagtcccagagatgattccaaatcttgctgaagcagaacccacaacgggc
aagcgaaaaagaggcaaggctccatcagagccaaaaccaaaaaaacaagctgcaaagagt
gcgaaagctccaaaatcgtctgggaagcaagagaagatcacagatacttttaaagtgaaa
agaaaagtggatcgttttaatggggtctctgaagctgaactcatgaccaagactttgcca
gacattctaacattcaacctggatattgtaattattgggatcaatccaggtcttatggca
gcatacaaaggccaccattacccaggaccaggaaaccacttctggaagtgtctgttcttg
tctggactaagtgatatgcagcttaatcatctagatgaccattcacttccagaaaaatat
ggtattgggtttactaatatggtggaaaggacgacaccagggagcaaggacctttcaagc
aaggaatttcgggaaggagggaggattcttttagaaaagctgcaaaaatataaacctcgc
gtagcagcattcaatggaaaatgtatttatgaaatttttagtaaagaaatatttggggta
aagattaaaaagttcgaatttggaatccagccacacagagtccctgaaacagacacagtt
tgttatgtcatgccttcatcgagtgctcgatgtgcacagtttccaagagctcaggacaaa
gtccatcactacattaagctaaaggagctacgaaaccagctcaagggagtagaaagcagt
cgggaagtccaggaagtgcagtactcatttgacctgcagttagcacaagcggatgcaaag
agacaagctataaaggaggaaaaatatgaccctggttacaatgaagccactggagaacaa
ttcaatgagcagacaacaagcggggaaagtggaatgtgcaacttctcaacagatgccaca
gtatcaagcaatccagagtttaatgggcaaggtcaaaatggacaatggattccccagcct
gttgctgaacagatgtcgacttacaaccacagtggcgaccaacagcaaggagggagcaac
gcttga
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integrated database retrieval system
