Xenopus tropicalis (tropical clawed frog): 493277
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Entry
493277 CDS
T01011
Symbol
sqstm1
Name
(RefSeq) sequestosome-1
KO
K14381
sequestosome 1
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04137
Mitophagy - animal
xtr04140
Autophagy - animal
xtr04217
Necroptosis
xtr04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
493277 (sqstm1)
04137 Mitophagy - animal
493277 (sqstm1)
09143 Cell growth and death
04217 Necroptosis
493277 (sqstm1)
04218 Cellular senescence
493277 (sqstm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xtr04131
]
493277 (sqstm1)
03029 Mitochondrial biogenesis [BR:
xtr03029
]
493277 (sqstm1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xtr04147
]
493277 (sqstm1)
Membrane trafficking [BR:
xtr04131
]
Autophagy
Mitophagy
Cargo receptors
493277 (sqstm1)
Pexophagy
493277 (sqstm1)
Aggrephagy
493277 (sqstm1)
Xenophagy
493277 (sqstm1)
ER-phagy
ER-phagy recepters
493277 (sqstm1)
Other autophagy associated proteins
Midbophagy
493277 (sqstm1)
Mitochondrial biogenesis [BR:
xtr03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
493277 (sqstm1)
Exosome [BR:
xtr04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
493277 (sqstm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA_5
ZZ
PB1
Motif
Other DBs
NCBI-GeneID:
493277
NCBI-ProteinID:
NP_001007894
Xenbase:
XB-GENE-5918988
UniProt:
Q66KM6
LinkDB
All DBs
Position
3:complement(22196571..22205639)
Genome browser
AA seq
452 aa
AA seq
DB search
MPVTVKAYLLGKDESHREIRRFQLELPAAGKEKASVSSCELLANKVTGVFQGLKGGAFQM
FYKDEEGDLVAFSTDEELHMGLSLLNEDVFRIYIKERKECKRDHRGHCGQETPQNVVHPN
VTCDGCDGPVVGNRFKCLICPDYDLCSTCEKKGIHKEHNMIMFPTPLVYPRSRWFRKMHH
GVPPFPWMQGWAYPPRGYPCQNFQQAQESTPPQNETPAEEAAATSDSQSSQNPNVAFLKN
VGESVAAMLSPLGIDVDIDVEHGGKRTKVSTSHPCSVDGDSQPNSSTSFTEIQDIASRSD
SAPNLMETEHIAKRMKDIALNSPLPQDNEQGENSSSASGGDDDWTHVSSKEVDPSTGELQ
SLQLMETGQPCSLDPTRSSALPTHAPTGLREAALYPHLPPEADPRLIESLSQMLSMGFTD
EGGWLTRLLEAKQFDIGSALDAMQSIRHIPPS
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgccggtcactgtgaaagcctatctgctgggcaaggatgagagccacagggagatccgc
cgcttccagctggagctgccggctgccggcaaagagaaggcgtccgtgtccagctgcgag
ctgctagctaacaaggtgacaggcgtgttccagggcctcaaagggggagccttccagatg
ttctacaaagatgaagaaggggatctggttgcattttccactgatgaggaacttcatatg
ggtctttccctgctgaatgaagatgtatttcgcatctacattaaagagagaaaagagtgc
aaacgtgaccatcgtggacactgcgggcaggaaaccccacaaaacgtagttcatccgaac
gtgacctgtgatggatgtgatgggcctgtggtgggaaacaggttcaagtgcctcatctgc
ccagattatgatctgtgcagcacttgtgagaaaaaaggaatccacaaggaacacaacatg
atcatgttccctaccccactggtctatccgcgcagccgttggttccgtaaaatgcatcat
ggagtccctcccttcccatggatgcagggctgggcctatccacccagaggatacccctgc
caaaattttcagcaggcccaggaaagcacccctcctcagaatgaaaccccagcagaggaa
gctgcagccaccagtgactcccagtcttctcagaatcccaatgttgccttcctgaagaat
gtcggagagagtgtggctgcaatgctgagccccctgggcattgacgtggacattgatgtt
gagcatggcggaaaaaggaccaaagtttcaacttcacacccctgttctgtggatggggac
tcgcagccaaacagctccacttcctttacagaaatccaggatatcgccagcagatctgac
tcggcacctaatctcatggaaactgagcacatcgcaaaaagaatgaaagatattgcactg
aattcgcctcttccacaagacaatgaacaaggggaaaatagcagcagtgcttcagggggt
gatgatgactggacccatgtctcatccaaagaagttgatccctccactggtgaacttcag
tcccttcagcttatggagacaggccagccgtgttccttagatccaaccagatcttctgct
ctgcccacacatgcacctacagggcttagagaagctgctctttatccacacctcccacca
gaagcagatcctcgcctcatagaatctctctctcagatgctttccatgggcttcacagat
gagggaggatggctcactcggctcctggaggcaaaacagttcgatattgggtctgctctg
gatgccatgcagtctatacgccacattcctccctcctaa
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