KEGG   Xenopus tropicalis (tropical clawed frog): 548771
Entry
548771            CDS       T01011                                 
Symbol
rnpc3
Name
(RefSeq) RNA-binding protein 40
  KO
K13157  U11/U12 small nuclear ribonucleoprotein 65 kDa protein
Organism
xtr  Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:xtr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:xtr03041]
    548771 (rnpc3)
Spliceosome [BR:xtr03041]
 Other splicing related proteins
  Minor spliceosome components
   Minor spliceosome specific factors
    548771 (rnpc3)
SSDB
Motif
Pfam: RRM_1
Other DBs
NCBI-GeneID: 548771
NCBI-ProteinID: NP_001016017
Xenbase: XB-GENE-920577
UniProt: Q07G30
LinkDB
Position
4:109694987..109710060
AA seq 527 aa
MAVSARSSYRPATDKLSRCLTITCNYRGLAGQEKPRAGIMSGSEERKTLLVRHIPSELTP
EEQRQLLEKSGAQSVRLGAGRNYKLRTTAFATYPNEFAAAKALSVLHQLTILGHTLVVEY
AKENHIHLSDQPPFSEKKKSAENKDDAKDKTPPDQISIERGIAPNHGLLFPIKSSLKYLY
PPPSSTILANIANALASVPKFYVQVLHLMNKLNLPAPFGPLTAQPPVYADYLALPMPYPP
VPPDLPENPPLPELDDDYDMEVSSREESEYESGEEEDKERMARLKEIATLLPKRKNQKKQ
SQPRKKKKLKDYITVPAVPHSNVHTPLQPSDVFEEPCIMGPKKLELHIPTDILTATQEPE
KEVEISEDLSGFGKIYPAQAPDIDDNEEEEDDDLPKEFISRRALEKGRITKEEMRKTSVF
KNYEPGEPNCRLYVKNLSKQAEEKDLKFIFGRFIDFSSETEKNMFDIRLMKEGRMKGQAF
IGFPTEDVAAQALKHVHGYVLHDKPMVIQFARSARPKPEASKTTKKK
NT seq 1584 nt   +upstreamnt  +downstreamnt
atggcagtgtccgcccgaagcagctatcgcccggctacggacaaactctcgcggtgtctc
acgataacgtgcaactatcgcggcctagctgggcaggagaagcctcgggctggaataatg
tctggttcggaagagaggaagacgctcctggtgcgacacattccttcagagctaactccg
gaggaacagaggcaactgcttgagaagagcggggcgcaaagtgtgcgcctgggagccggg
cggaattataagctgagaactactgcattcgctacctatccaaatgaatttgcagcagca
aaggctctgtctgtacttcaccaacttaccatcttggggcacactctcgtggttgaatat
gctaaagaaaatcacattcacttatcagaccagcctcctttctctgaaaaaaagaaaagt
gcagagaacaaagatgatgcgaaagacaagactcctccggatcagatatctatcgaaaga
ggaatagccccaaatcatggacttctctttccaataaagtccagtctaaagtatctgtat
cctccaccaagcagcactattctggcaaatattgccaatgctttggcaagtgttccaaag
ttctatgttcaggtgttgcatttaatgaataaactgaatttaccagctccttttggacca
ctaacagctcagcctccagtatatgcagactatttagcactacctatgccatacccacct
gtgccaccagaccttcctgaaaacccccctttgccagagctcgatgatgattatgacatg
gaggtgtccagcagggaagagtcggaatatgagagtggggaagaggaggataaagagaga
atggctcgtctgaaggaaatagcaactttgctgcctaagagaaaaaatcaaaagaagcaa
agccagccacgaaaaaagaaaaagttaaaagattatattactgtgcctgctgtgcctcat
agcaatgttcacacaccattacagccttctgatgtatttgaagaaccatgtattatgggc
ccaaaaaaactggaactgcatattcctactgacattctaacagctactcaggagccagaa
aaagaagttgaaataagtgaagatttatctgggtttggcaagatttacccagcccaagct
ccagacattgatgacaatgaggaggaagaagatgatgatttgcctaaggaatttatttct
aggagagcgctcgaaaaaggaagaattactaaagaagaaatgaggaaaacgtctgttttc
aaaaactatgaaccaggcgaaccaaactgcagactgtatgtaaaaaacctctccaagcag
gctgaagaaaaggatcttaagtttatctttggaaggttcatcgacttctcatctgaaaca
gaaaagaatatgtttgatattcgtctgatgaaagaagggaggatgaagggccaagctttc
ataggatttcccactgaagatgtagcagcacaggcgttgaaacacgtgcatggatatgta
ctccatgacaagccaatggtgattcaattcgctcgatctgctcgtccaaagcccgaagcc
tctaaaacaacaaagaagaaatag

DBGET integrated database retrieval system