Xenopus tropicalis (tropical clawed frog): 549016
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Entry
549016 CDS
T01011
Symbol
c9orf72
Name
(RefSeq) guanine nucleotide exchange C9orf72 homolog
KO
K23609
guanine nucleotide exchange protein C9orf72
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
549016 (c9orf72)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
xtr04131
]
549016 (c9orf72)
Membrane trafficking [BR:
xtr04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
549016 (c9orf72)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C9orf72-like
Motif
Other DBs
NCBI-GeneID:
549016
NCBI-ProteinID:
NP_001016262
Xenbase:
XB-GENE-5871697
UniProt:
A4IGL2
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All DBs
Position
1:complement(122457520..122506972)
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AA seq
307 aa
AA seq
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MLTGEVIPIMELLSSIKSHGVPEEIDITSTVLNDDDIGDSCHGDFLINAISSHMQTCGCS
VVVGSSAEKVNKMVRTLCLFLSPTERKCSRLCRSESSFQYESGLFVQGLLKDATGSFVLP
FRQVMYAPYPTTHIDVDIFTVKQMPPCHEHTYNQRRYMRAELGALWKATSDEEIGMDSVI
HSDETFTPNLNIFQDILHRDTFVKNFLDQVFQLKPNLSLRSTFLAQFLLVLHRKALTLIK
YIEDDTQKGKKPFKSLRSLKTDLDLAAEGDLYIIMALAEKIKPGLHSFIFGSSFHTSMQE
RDVLMTF
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgttgactggagaagttatccccataatggaacttctttcttctataaagtcgcatggt
gtcccagaagagatcgatattacttcaactgtacttaatgatgatgacattggtgacagc
tgtcatggtgatttcctcatcaacgctatcagttcacacatgcagacctgtggctgctct
gtggtggtaggcagcagtgcagagaaagtaaacaagatggtgaggacactgtgtctcttt
ctgtctccaacagaaaggaaatgttccagattatgtcgctctgaatcttctttccagtat
gaatctggcctctttgtgcaaggactattgaaggatgcaacaggaagttttgtgctgcca
tttcgccaggttatgtatgcaccttacccaaccactcacattgatgtggatatattcacc
gtgaagcagatgcctccatgtcatgagcacacttataatcagaggcgctacatgagggca
gagctgggtgctctttggaaagccacttcagatgaggagattgggatggattcagtcatt
cacagtgatgagaccttcactcctaatctcaacatatttcaagatatcctgcacagagat
acatttgtgaaaaactttttagaccaggttttccagttgaaaccaaacttatccttgcga
agcacatttctggcacagtttctgctcgtgcttcatagaaaggctctaaccttgatcaaa
tacattgaggatgacacacaaaaaggcaagaaacctttcaaatctctgcgtagtctgaaa
acagacctggacctagcagcagagggcgatctctacataatcatggccttggctgaaaag
atcaagccagggcttcattcatttatatttggcagttcgtttcacacaagcatgcaagag
agggatgtactgatgacattttaa
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