Xenopus tropicalis (tropical clawed frog): 549246
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Entry
549246 CDS
T01011
Symbol
vdac1
Name
(RefSeq) voltage-dependent anion-selective channel protein 1
KO
K05862
voltage-dependent anion channel protein 1
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04020
Calcium signaling pathway
xtr04217
Necroptosis
xtr04218
Cellular senescence
xtr04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
549246 (vdac1)
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
549246 (vdac1)
04218 Cellular senescence
549246 (vdac1)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
549246 (vdac1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
xtr03029
]
549246 (vdac1)
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
xtr04040
]
549246 (vdac1)
Mitochondrial biogenesis [BR:
xtr03029
]
Mitochondrial protein import machinery
Outer membrane
Porin
549246 (vdac1)
Ion channels [BR:
xtr04040
]
Chloride channels
Maxi chloride channel (VDAC)
549246 (vdac1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Porin_3
Motif
Other DBs
NCBI-GeneID:
549246
NCBI-ProteinID:
NP_001016492
Xenbase:
XB-GENE-955063
UniProt:
Q28HL9
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Position
3:22877148..22893428
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AA seq
283 aa
AA seq
DB search
MAIPPAYADLGKSARDIFTKGYGFGFIKLDLKTKSENGLEFTSSGSANAETNKVAGSLET
KYKWAEYGLTFTEKWNTDNTLGTEITVEDQLAKGLKLTFDSSFSPNTGKKNAKVKTAYKR
EHLNIGCDMDFDIAGPSVRGAAVFGYEGWLAGYQMTFESSKSRVSQSNFAVGYKTDEFQL
HTNVNDGTEFGGSVYQKVNDKLETAINLAWTAGNSNTRFGIAAKYQIDSDASFSAKVNNS
SLIGLGYTQTLKPGIKLTLSTLLDGKNINAGGHKLGLGLEFEA
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atggccatacctccggcatatgctgatttaggaaagtctgcccgagacatcttcactaaa
ggatatggatttgggttcattaaacttgatttgaaaacgaaatcagaaaacggactggaa
tttacaagctcaggatcagcgaatgcagagactaacaaagttgctggcagcttggaaacc
aaatacaaatgggcagaatatggccttactttcacagaaaagtggaatacagataacaca
ttagggacagagatcactgtagaagaccagcttgcaaagggtctgaagctgacatttgac
tcttcattttctcctaacacaggaaagaagaatgcaaaagtcaagactgcatacaagcga
gagcaccttaacattggctgtgacatggatttcgatattgctggcccatcagtgcgggga
gctgcagtgtttggctatgagggatggttagctggctaccaaatgactttcgaatcctca
aagtccagagtctcccaaagcaactttgcagttggatacaaaactgatgaatttcagttg
cataccaatgtaaatgacggtacagagtttggtggttctgtatatcagaaggttaatgat
aaactggaaactgcaatcaaccttgcatggacagcaggaaacagcaatacacgcttcgga
atagcagccaaatatcaaatcgatagtgatgcttcgttttcagctaaagtgaataattca
agtcttattggtttaggatacactcagactcttaagcctggtatcaaattaacgttatcc
acattgctcgatggcaagaacataaatgccggaggtcacaaactgggtctaggactggaa
tttgaagcataa
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