Xenopus tropicalis (tropical clawed frog): 549680
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Entry
549680 CDS
T01011
Symbol
hnrnpa2b1
Name
(RefSeq) heterogeneous nuclear ribonucleoproteins A2/B1 isoform 2
KO
K13158
heterogeneous nuclear ribonucleoprotein A2/B1
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xtr03019
]
549680 (hnrnpa2b1)
03041 Spliceosome [BR:
xtr03041
]
549680 (hnrnpa2b1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xtr04147
]
549680 (hnrnpa2b1)
Messenger RNA biogenesis [BR:
xtr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
549680 (hnrnpa2b1)
Spliceosome [BR:
xtr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
hnRNP proteins
549680 (hnrnpa2b1)
Exosome [BR:
xtr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
549680 (hnrnpa2b1)
Exosomal proteins of colorectal cancer cells
549680 (hnrnpa2b1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
HnRNPA1_LC
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
549680
NCBI-ProteinID:
NP_001016926
Xenbase:
XB-GENE-490993
UniProt:
A0A8J0PIK9
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All DBs
Position
6:complement(41638021..41645334)
Genome browser
AA seq
328 aa
AA seq
DB search
MEREKEQFRKLFIGGLSFETTEDSLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSM
DEVDASMAARPHTIDGRVVEPKRAVAREESAKPGAHVTVKKLFVGGIKEDTEEHHLREYF
EEYGKIESIEIITDKQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKALSKQE
MQDVQNTRNSRGGNFGFGDSRGGGNFGSGPGGNFRGSSDGYGGGPGYGGGRGGYGGSPGY
GNQGGGGGGGGYGGGYDNYGGGNYGGGGSYNDFGNYNQQSSSYGPMKSGGNFGGNRSMGG
PYGGGNYGPGSGSGGGSGGGGYGGRNRY
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atggagagagaaaaggaacagttccgcaagctatttattggcgggctcagctttgaaaca
accgaggacagtctgcggaattactatgaacaatgggggaagcttacagactgtgtggtc
atgagagatcctgcaagtaaaagatccagggggtttggatttgtaacattctcttccatg
gatgaagtcgatgcatctatggcagcacgcccacatactatcgatggcagagtggtcgag
cctaagcgagctgttgccagagaggaatctgccaaacctggtgcccatgtcactgttaag
aaattgtttgttggtggcattaaggaagacacagaagagcatcaccttagagagtacttt
gaagaatatggcaaaattgagagcattgaaatcattactgacaaacagtctggaaagaag
agaggctttggatttgtgacatttgatgatcacgacccagtggataaaatagttttgcaa
aagtatcacacgataaatgggcataatgcagaagtaagaaaagccttatccaagcaagaa
atgcaagatgttcagaacacccgaaatagtagaggaggtaactttggatttggagattca
cgaggtggtggaaactttggttccggaccagggggcaacttcagaggatcatctgatggt
tatggaggtggacctggatatggaggagggcgaggaggatatggaggtagccctggctat
ggcaaccaaggaggaggaggaggtggcggcggctatgggggaggctatgacaactatggt
ggaggaaactacggtggtggcggaagctacaatgactttgggaactataaccaacagtct
tccagttatggaccaatgaaaagtggaggaaactttggtggaaacaggagtatgggagga
ccatatggaggagggaactatggtcccggaagtggtagtggtggtggaagtggcggtggc
ggatatggaggaagaaatcgctattag
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