Xenopus tropicalis (tropical clawed frog): 549805
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Entry
549805 CDS
T01011
Symbol
lfng
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase lunatic fringe
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr00514
Other types of O-glycan biosynthesis
xtr04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
549805 (lfng)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
549805 (lfng)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
xtr01003
]
549805 (lfng)
Enzymes [BR:
xtr01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
549805 (lfng)
Glycosyltransferases [BR:
xtr01003
]
Glycan extension
O-Glycan
549805 (lfng)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fringe
Galactosyl_T
Motif
Other DBs
NCBI-GeneID:
549805
NCBI-ProteinID:
NP_001017051
Xenbase:
XB-GENE-487975
UniProt:
F6UP69
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Position
9:31542832..31553701
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AA seq
372 aa
AA seq
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MLKNCGKKLLLSMVGATLTCLLVLMVDQQSRPMVQSREEPGAGAAHLRAALEPANPGDEG
NANKGAQDAGTFSAYFNKLTRVRRDVEQVATPSKASQAPVEDITANDVFIAVKTTKKFHR
SRMDLLMDTWISRNKAQTFIFTDGEDEELQKKTGNVISTNCSAAHSRQALSCKMAVEYDK
FIESNKKWFCHVDDDNYVNVQTLVKLLSRYSHTNDIYIGKPSLDRPIQATERISENNMRP
VNFWFATGGAGFCISRGLALKMSPWASGGNFMNTAEKIRLPDDCTIGYIIESVLGVKLIR
SNLFHSHLENLHQVPQSEIHNQVTLSYGMFENKRNAILMKGAFSVEEDPSRFRSVHCLLY
PDTPWCPWKAAY
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagaactgtggaaagaagctgttgctgtccatggtgggtgcgaccctcacctgc
ctgctggtgctcatggtggatcagcagagccggccgatggtgcagagcagagaggagccc
ggcgctggagccgctcatttacgggcagccctggagcccgccaaccccggggatgagggg
aacgctaacaagggagcccaggatgccggcaccttctccgcttatttcaataaactcacc
cgggtgaggagagacgtggagcaggtggcgaccccgtccaaagcttcccaggctcccgta
gaagatatcacggccaacgatgtattcatagcggtgaaaaccaccaaaaaattccaccgg
tcccgaatggacctgctgatggacacgtggatctcccgcaataaggcgcaaacttttatc
ttcactgatggggaagacgaagagcttcagaaaaagacaggcaatgtaattagtacaaac
tgctcagctgctcacagccgccaagctctttcctgcaagatggcagtagaatatgacaag
ttcatagagtctaataagaagtggttctgccatgtcgacgatgataactatgtaaatgtc
cagacactagtgaaactgctttctcgatactcccataccaacgatatctacattgggaag
ccaagcttagaccggcctatccaagctacagagaggatcagtgagaacaatatgcgtcct
gtcaatttttggtttgctactggaggagctggcttctgtattagccgtggattggccctt
aaaatgagtccatgggcaagtggagggaatttcatgaatacagcagaaaagatcaggctt
cctgatgactgcaccattggttatatcattgagtctgtgttgggagtgaaactcatccgc
agtaacctctttcattcgcatctggagaatctgcatcaagttccccagagtgagatccac
aatcaggtgacattaagttatgggatgtttgaaaacaagcggaacgccattttgatgaag
ggtgccttttctgtagaagaagatccttcacggttccggtctgtccattgcttactatac
ccagatactccctggtgtccgtggaaagctgcttactag
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