Xenopus tropicalis (tropical clawed frog): 549935
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Entry
549935 CDS
T01011
Symbol
psen2
Name
(RefSeq) presenilin-2
KO
K04522
presenilin 2 [EC:3.4.23.-]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
549935 (psen2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
xtr01002
]
549935 (psen2)
Peptidases and inhibitors [BR:
xtr01002
]
Aspartic peptidases
Family A22: presenilin family
549935 (psen2)
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GFIT
Motif
Pfam:
Presenilin
DUF6541
Acyl_transf_3
Motif
Other DBs
NCBI-GeneID:
549935
NCBI-ProteinID:
NP_001017181
Xenbase:
XB-GENE-854877
UniProt:
Q28HZ1
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Position
5:complement(51178163..51192461)
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AA seq
451 aa
AA seq
DB search
MITFANSSDSEDDECNERTSLITSQSPPLPSYQDGLQASGGSESSDPMKTQTDTQVIEDV
PNGRTSGADAYNSDAAMENEEEELTLKYGAKHVIMLFVPVTLCMVVVVATIKSVSFYTEK
DGQLIYTPFSEDTTSVGQRLLNSVLNTLIMISVIIVMTIFLVLLYKYRCYKFIHGWLILS
SLMLLFMFTYIYLSEVFKTYNIAMDYPTLFMVIWNFGAVGMICIHWKGPLQLQQAYLIMI
SALMALVFIKYLPEWSAWVILGAISVYDLLAVLCPKGPLRMLVETAQERNEPIFPALIYS
SAMVWTVGMADSATADGRMNQQVQRTDRNAPNHTNSSQEDAAETSVQTQSNVSSEDPDEE
RGVKLGLGDFIFYSVLVGKAAATASGDWNTTLACFVAILIGLCLTLLLLAVFKKALPALP
ISITFGLIFYFSTDNIVRPFMDTLASHQMYI
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgataacattcgcaaacagctcagacagcgaggatgacgaatgcaatgagagaacgtct
ttgatcacatctcagagtccccctttaccatcataccaagatgggctccaagcttcagga
gggtcggaatcttctgatcccatgaaaacacagacagacacacaggttattgaagatgtg
cccaatggcagaacatctggtgcagatgcatataacagtgatgctgcaatggaaaatgag
gaagaagagctgactctcaaatatggcgcaaaacacgttatcatgctctttgttccagtc
actctgtgcatggtggttgttgtcgctacaataaaatctgttagcttctacacagaaaaa
gatggacagctaatctacacgccattttctgaagataccacatcagttggccaaagactc
ttaaactctgtgcttaatactcttataatgatcagtgttataattgtgatgaccattttc
cttgtacttctttataaatatcgctgttacaagtttattcatggttggctgattctctca
tctttaatgctgctttttatgtttacatatatatatcttagtgaagttttcaagacatac
aacatagcaatggattacccaaccttattcatggttatatggaattttggggcagtagga
atgatttgtattcattggaagggtccccttcagctacagcaagcctatctaatcatgata
agtgcacttatggctcttgtctttattaagtatctgccagaatggtcagcatgggttata
cttggagctatttctgtttatgatctgctagcagtgctttgccctaaaggtcctttaagg
atgcttgtagaaactgcacaagaaagaaatgagccaatatttcctgcgctaatatactct
tctgctatggtgtggacagtgggaatggcagattctgctacagcagatggaagaatgaat
cagcaagtgcagcgtacagacagaaatgcacctaatcatacaaacagctcacaagaggat
gctgccgagaccagcgttcaaacacagagtaatgtgtcttccgaggatccagatgaggaa
aggggagtgaaacttggtcttggagacttcatattctacagtgtactagttggaaaagca
gccgcaactgctagtggagactggaataccacattggcttgttttgtggccattttaata
ggtttatgtctgacgctgttgttgctggcagttttcaagaaggccctccctgccctaccg
atttctatcacctttggtttaatcttctacttttctacagataatatagtacggcctttc
atggacactcttgcatcccaccaaatgtacatttag
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