Xenopus tropicalis (tropical clawed frog): 549988
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Entry
549988 CDS
T01011
Symbol
hsd17b12
Name
(RefSeq) very-long-chain 3-oxoacyl-CoA reductase
KO
K10251
17beta-estradiol 17-dehydrogenase / very-long-chain 3-oxoacyl-CoA reductase [EC:
1.1.1.62
1.1.1.330
]
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr00062
Fatty acid elongation
xtr00140
Steroid hormone biosynthesis
xtr01040
Biosynthesis of unsaturated fatty acids
xtr01100
Metabolic pathways
xtr01212
Fatty acid metabolism
Module
xtr_M00415
Fatty acid elongation in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09100 Metabolism
09103 Lipid metabolism
00062 Fatty acid elongation
549988 (hsd17b12)
00140 Steroid hormone biosynthesis
549988 (hsd17b12)
01040 Biosynthesis of unsaturated fatty acids
549988 (hsd17b12)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
xtr01004
]
549988 (hsd17b12)
Enzymes [BR:
xtr01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.62 17beta-estradiol 17-dehydrogenase
549988 (hsd17b12)
1.1.1.330 very-long-chain 3-oxoacyl-CoA reductase
549988 (hsd17b12)
Lipid biosynthesis proteins [BR:
xtr01004
]
Fatty acid synthase
Component type
549988 (hsd17b12)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
adh_short
adh_short_C2
KR
Epimerase
NAD_binding_10
F420_oxidored
Sacchrp_dh_NADP
3HCDH_N
Polysacc_synt_2
TrkA_N
DUF4079
Shikimate_DH
Motif
Other DBs
NCBI-GeneID:
549988
NCBI-ProteinID:
NP_001017234
Xenbase:
XB-GENE-945229
UniProt:
Q28IU1
LinkDB
All DBs
Position
4:9919994..9971647
Genome browser
AA seq
320 aa
AA seq
DB search
MATESLAEVPVPGCNCFWYLGVVAAVWWGLRAAWCLLDGARVWVLGSGAQVGPRIGKWAV
VTGATDGIGKAYAEELAKRGMNIVLISRSPEKLEEVAKQIKEKFKVETKIIAADFGKPTE
IYGRIESGLRDLEIGVLVNNVGVSYEHPEYFLEIPDLENTLDKMININITSVCQMTRLVL
PGMLGRGRGVILNISSASGMYPVPLLTVYSATKAFVDFFSRGLQAEYRSKGVTVQSVLPF
YVATKLAKIRKPTWDKPSPETYVQSALNTVGLQTQTNGYLPHAIMGWISTSLVPVSTAIS
LGMKMNKGLRARFLKRAKQK
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atggccacggagtccctggcggaggtcccggtacctggctgtaattgcttctggtacttg
ggtgtggtagcggccgtctggtgggggctgagggctgcatggtgcttgctggacggtgcc
cgggtctgggtactggggagtggagcgcaggtgggccccaggatcgggaaatgggcagtg
gttaccggtgccaccgatgggatcggaaaagcctatgctgaagagctcgcaaagcgggga
atgaatatcgttctgatcagcagatctcctgaaaaactcgaagaggtcgctaaacaaata
aaagagaaattcaaggtggagacgaagatcattgcggcggattttgggaaacccacggaa
atctacgggcggatagaatcgggcttgcgagatctggagattggcgtccttgttaacaat
gttggcgtttcttatgaacacccagagtatttcctcgaaatcccagacttggaaaatacc
ctggacaaaatgatcaatattaacattacgtcagtatgtcagatgacgcgcttggtgctg
ccgggaatgctgggaagaggcaggggcgtcatcttgaacatctcctccgccagcggcatg
tatcccgtccccttactgactgtgtattcggctactaaggcgtttgtggatttcttctcc
cgggggctccaagccgagtacagaagcaagggtgtcaccgtgcagagcgttctcccattc
tatgttgccaccaaactggccaagatccgtaagccgacctgggacaagccaagccctgaa
acctacgtccaatcagctctgaatacggtgggcttacagacgcagaccaatggctacctg
ccccacgccatcatgggttggatcagcacctcccttgtgccggtctccaccgccatcagc
ctgggcatgaagatgaacaagggtctccgcgctcggttcttgaagagagcgaaacaaaaa
tag
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