Xenopus tropicalis (tropical clawed frog): 733844
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Entry
733844 CDS
T01011
Symbol
nlrc4
Name
(RefSeq) NLR family CARD domain-containing protein 4
KO
K12805
NLR family CARD domain-containing protein 4
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04621
NOD-like receptor signaling pathway
xtr05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
733844 (nlrc4)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
733844 (nlrc4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
xtr04054
]
733844 (nlrc4)
Pattern recognition receptors [BR:
xtr04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
733844 (nlrc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
Nlrc4-like_WHD
CARD
NLRC4_HD
nSTAND3
ATPase_2
AAA_30
NOD2_WH
AAA_22
AAA_19
AAA_16
NB-ARC
Motif
Other DBs
NCBI-GeneID:
733844
NCBI-ProteinID:
XP_002933913
Xenbase:
XB-GENE-5858611
UniProt:
A0A4X2QK42
LinkDB
All DBs
Position
5:complement(42382908..42398839)
Genome browser
AA seq
1016 aa
AA seq
DB search
MDLIRKNYAELVQRMGRTIAVQITNDLFTRNILSMGEMEEILSCKVAQDLTRELLNVILK
KGTESCTRLLQSLENQDPFFYEDLIGQRVQSGVTEEDLENLADHLKRLYQYPFFKKFNPL
GEDTDIDIIFDLDRTFTDPLLWRKGTLNRREKQLTLSEMLEQLESPCVIEGEAGKGKTTI
LKRIAMLWASEKCRALADFKLVFFVTLRGASEGLYETLSDQLFPITYSWNKKEFLNKIWH
LGRKVLFLLDGYDEFQSESCTEIEELIKNNPKFNSTVIVSTRTETIGKLRRCGALIAETS
DFSLDNAKQLIANVLEEDEANGLLFQLEESSFMQNLMKTPLFVVIACALRMGESDFQMNT
QTTLFSTLYDLMVEKKKYKIRHLSANILAANIRKFGDLALDGLFEQRFDFNEKHLSKIKE
EVLLNIGLLNKYTAQRRKAVYRYFHTTFQEYIAGRRLSQLLSSEDNSDVTKGEDFLNKIV
SVFDITTKYKNLLLYTCGSSKVATQKVVKHVAEVHKHDKNNYSTELVEFGLNLFFESSTK
KELSQDFETLFSEKCLYINSHNISSHHIEFFLYLPNCLSALQLIKLDLSGTFATVPSEST
MDRDSKSAQSSVCDNYIPEKAVKLFFDWNQSIQTLEVTLRDFHQLNKKDIKYLGKICCSA
DSLRLNIKRSSGITGSLVGVLESCKNIQDLNVDSTKLSIEDERRIVQMTEMKTLSILNLH
SEHLQGGLLEGLCNLVGLEKLVFHNIKIDKNDAKTLAEGILSLKKLKRLSISHISNIGDG
MESIAESISLCCHELKELKLIDCCLSAKALRSLAFRLKMFSSIEILDLSGNYLLEEGKES
VEELAANLTHLDAIRTLMLPGGTDVKFCLEAVLPTLRRIPTLSELAFKRWNLTNDDLMTL
ASYINSGFENLSFLDLSDNCAQSAGWLSLTAILQYLPNLTYVNFSTEDLFTPDPDLVRKL
VRAISALPLLHTMELNNWQLDDFDLAQIKKAKNMIHRPGNTCGHFFQVSNMEFDGR
NT seq
3051 nt
NT seq
+upstream
nt +downstream
nt
atggatttaattaggaaaaactatgcagagctggttcagagaatgggaaggacgattgct
gtacagataactaatgacctgttcacaagaaatattctttctatgggtgagatggaggaa
attctgtcctgtaaggtggcacaagatctaacaagagaactgcttaatgttattttaaaa
aaaggcacagagtcctgcactcggttacttcagtccctcgaaaatcaagatccttttttc
tatgaagacttgattggacagcgagttcagagtggagtcacagaagaagatttagaaaac
ctagctgaccacttaaagcgtctgtatcaatacccctttttcaagaaatttaatccgctg
ggtgaggacactgacatcgatatcatttttgatttagaccgaacatttacagatccattg
ctctggaggaaaggaacccttaaccgaagggaaaaacagttgacgttaagtgaaatgttg
gaacaactggaaagcccttgtgttattgaaggagaagcagggaaggggaaaacaactata
ctcaagagaattgctatgctttgggcatctgaaaaatgtagagcattagcagattttaaa
cttgtcttctttgtcaccctgcgtggtgctagcgaagggctctatgaaacactctctgac
cagctttttcctataacttactcatggaataaaaaagaatttctgaataaaatatggcat
ttaggaagaaaagtattgttcttgcttgatgggtatgatgaatttcagtcggagagctgc
acagaaattgaagaacttattaaaaacaatcctaaatttaacagcacagtgattgtgagt
acaagaacagagacaattggaaaactgaggaggtgtggtgcgcttattgctgaaacaagt
gatttttctttagataatgctaaacagttaattgcaaatgttttagaagaggatgaagca
aatggcttgttgttccagttagaagaatcaagttttatgcagaaccttatgaagaccccc
ttatttgtcgtaattgcttgcgctcttcggatgggggaaagcgattttcaaatgaacacc
cagacaacactgttcagtacattatatgacctaatggttgaaaaaaaaaagtacaaaatt
agacaccttagtgcaaacatcctagctgcaaacatcaggaaatttggagatctggccctg
gatgggttgtttgaacaaagatttgactttaatgagaagcatctgtctaaaattaaggaa
gaggttctcttaaatataggcctgctaaataaatacactgctcagaggcgcaaggccgtt
tacagatattttcatacaacatttcaggaatacattgccgggaggagactctctcaactt
ctatcttctgaagacaactcagatgttactaaaggagaagattttttaaataagattgtt
tctgtttttgatatcaccactaaatataaaaatctcctcttatatacttgtggatcatcc
aaagtagcaacacagaaagttgtaaaacatgttgccgaagtacacaaacatgacaaaaat
aattacagtacagagttggtagagtttgggcttaaccttttctttgaaagctccaccaaa
aaagaattaagtcaagattttgaaactctcttttctgagaaatgcttgtatattaattcc
cataatatctcttctcaccatattgaatttttcctatacttaccaaactgccttagtgca
ttacaactgataaagttggatctatctggtacttttgccactgtaccaagtgaaagcact
atggacagagattccaaaagtgcacagtccagtgtttgtgacaattatattccagagaaa
gcagtcaaattattttttgattggaatcagtcaattcagactttggaggttacactcaga
gattttcaccaattaaataaaaaagatataaaatacctgggcaaaatatgttgctccgct
gacagtcttcgactgaacattaaaagaagttcaggaataactggatccttggtgggtgtt
ttggaatcctgtaagaatatacaagatttaaatgttgatagcaccaaactaagcattgaa
gatgagagaagaattgtacaaatgacggagatgaaaacactgagtatattaaacctacac
agtgaacatctacaaggtggactattagagggtttgtgtaatctagtagggcttgaaaaa
ttggttttccataacattaaaatagacaagaatgatgcaaaaactctggctgaaggcatt
ttaagtctgaagaagttaaagaggttatccatatctcatatctccaacattggagatggc
atggagagtattgcagaatcaatttccttatgttgccatgagcttaaagaactgaaatta
attgactgttgtttgagtgcgaaagctctcaggagtcttgcattccgcttaaaaatgttc
tctagcattgaaatattggatttgtctggaaattatttactagaagaagggaaggaatca
gtagaagaactggctgccaacttgactcatcttgatgcaataaggacacttatgctgcct
ggaggaacagatgtaaagttttgcctggaggcagtattacctacattgaggcgcattcct
accttgtcagaacttgcttttaaacgatggaacttgaccaatgatgacttgatgacatta
gcttcgtatataaatagcggctttgaaaacctttcatttttggatctttctgataactgt
gctcaaagtgccggctggctttccctgactgccatactacaatatctgccaaatctgacc
tatgtaaactttagcactgaggacctcttcactccagatccagatttagtgcggaagctg
gttcgtgcaatatcagcgctgccattgttacacacaatggaactaaacaattggcaacta
gacgattttgacctagctcaaatcaaaaaagcaaaaaatatgatccaccggcctgggaat
acatgtggtcactttttccaagtcagtaacatggaatttgatggaagatag
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integrated database retrieval system
