Xenopus tropicalis (tropical clawed frog): 734013
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Entry
734013 CDS
T01011
Symbol
tiam1
Name
(RefSeq) T-lymphoma invasion and metastasis-inducing protein 1 isoform X1
KO
K05731
T-lymphoma invasion and metastasis-inducing protein 1
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Pathway
xtr04530
Tight junction
xtr04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
734013 (tiam1)
09142 Cell motility
04810 Regulation of actin cytoskeleton
734013 (tiam1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
xtr04990
]
734013 (tiam1)
Domain-containing proteins not elsewhere classified [BR:
xtr04990
]
Pleckstrin homology (PH) domain-containing proteins
Dbl-Like RhoGEF family proteins
734013 (tiam1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_Tiam1
RhoGEF
Tiam_CC_Ex
PH
RBD
PH_9
PDZ
SOS1_NGEF_PH
PDZ_2
PDZ_6
PH_11
GNAT_acetyltran
Motif
Other DBs
NCBI-GeneID:
734013
NCBI-ProteinID:
XP_002938487
Xenbase:
XB-GENE-1006478
UniProt:
A0A803K4V1
LinkDB
All DBs
Position
2:15699169..15878262
Genome browser
AA seq
1590 aa
AA seq
DB search
MGNAESQNVEQALYGKEHGTLGRKHTSRSLRISNKNSRRTRHASSGKPVHRNSEVSNRSS
STPSIPQSLAENGMEPYSQDANLDDFDSRDWVDMGLRPVSYHTDSSVTPSLNSSTVLTAA
SMQSMQDCEESRLYGEDHSYFQDGNGRSQIYTTNGPNLLDAASFKKKRSKSADIWREDSL
EFSLSDLSQEHLTSTEEILCSTEEKDCEETIIAEAGNNAKLNSSQRANSLTDLYPQINPH
ASVNGAPRSKFMVYCRNLVSHSPESENYKMDPTSAEETPPYSNYSTLPCRKSHCLSEGAA
NLKLSHTNSMHGRRAKTTQDVNTGGEGSEFTDSGIEAATTDTDIISRRSNITTSSYSPTA
SRVFIGSDSGSSSTGDVLRQGVYENFRRELEMSRASRENLEEASSALSDEQSSGTLSSPG
QSDILLTAAQGTVRKAGALAVKNFLVHKKNKKVEPATRRKWKQYWVSLKGCTLFFYETDG
RSGIDNNSIPKHAVWVENSIVQAVPEHPKKDFVFCLSNSLGDAFLFQTTSQTELENWITA
IHSACATTVARQHHKEDTVKLLKSEIKKLEQKIDMDEKMKKMGEMQISSVTDAKKKKTIL
DQIFVWEQNLEQFQMDLFRYRCYLSSLQGGELPNPKRLLAFASRPTKVAMGRLGIFSVSS
FHALVAARTGESGVRRRTQAMSRSASKRRSRFSSLWGLDTSSKKKQGRTSVTQVFSDGSE
SVKKSLEGIFDETMSEEKKEKEVALSTVHPHNPDTDIWVHDYLTPSWVCLPNDQPVLIVI
HPDDMAKDALEIICKTHQLDYTSYYLRLKFLMDNQTQIYIPKPEEEIYELLYKEIEICPK
VTKHIQLEKGGGASESFGFALSSVEEDGRHHLYVNNVKESGLAYKKGLKVGDEVMEINAK
PARELNSSVLKNILCKSSLYLTVRTCPDAGDCPLEALPRRSDTDCNDFLLLSNRDCSETD
SCSETAPEEIEVQLDAPEEADSINKSTEQVAALRRSPHEMNSPDSCLSPSEFAGPALATM
RQLTDADKLRKVICELLETERTYVKDLNCLMERYLKPLQKEPFLTQDELDVLFGNLTEMV
EFQVEFLKTLEDGVRLVPDLEKLEKVEQFKKVLFSLGGSFLYYADRFKLYSAFCASHTKV
PKVLVKAKTDSNFKAFLDAQNPKQQHSSTLESYLIKPIQRILKYPLLLKELYSLTDAESE
EHYHLDVAIKTMNKVASHINEMQKIHEEYGAVFDQLISEQSGEVKEVADLSMGDLLLHNT
VTWLNPPASLGKWKKDPELATFVFKTAVVLVYKDSSKQKKKLGGSHRASMFEDRDPFRFR
HMIPTEALQVRTMTTSDAETNSVCEIVHVKSESEGRPERAFHLCCSNPGRKKEFLRAVHS
ILRDKHRRQLLKTESLPNSQQYVPFGGKRLCALKGARPTMNRAVSAPSRSLARRRRLVRN
RFTIDSDSIFSNDPEKDSDQETEPSPPQQSSNSGDTDRWVEEQFDLAQYEEQDDVKETDI
LSSDDEYCESIKGGSMEKDLSEQLEATSLSSNPMGTKVQNTMNTHASRMAQLKKQTAFSG
MNGSIESNTDEVIWVKREDFVPVRKLNTEI
NT seq
4773 nt
NT seq
+upstream
nt +downstream
nt
atgggaaacgccgaaagccaaaatgtagaacaagctttgtatgggaaagagcacggcact
ttgggtcggaagcacacatctcgctcactccgtatttccaataagaattctcgcaggacc
cgtcatgcttcatcagggaaaccagtacatcggaattccgaagtcagtaaccggtcaagc
agcacccccagcatcccccagtctttagcagaaaatggtatggagccgtactctcaagat
gccaacctggacgactttgacagccgggactgggtagatatgggtctgagacccgtttct
taccatacggattcttccgtcaccccgagtctaaacagcagcactgttctcaccgcggcc
tccatgcagagcatgcaggactgtgaagaaagtagactttatggtgaagaccactcttat
ttccaagatggaaacgggagatctcagatctacaccacaaatgggccaaacctcttggat
gcagccagttttaagaaaaagcgttctaaatcagcggatatatggagagaggacagcttg
gagttttccctttctgatctgagccaagaacacttaacaagcacggaggaaattttatgc
tcaactgaggagaaagattgtgaggagaccataatagccgaggcaggtaataacgccaaa
ctgaattccagccaacgtgccaattccttgacagacttgtacccacaaattaacccacac
gcgtctgttaatggtgcacctaggagtaaatttatggtctactgccggaacttagtgtcc
cactcaccagaatcggagaattacaaaatggaccccacttctgccgaagagactccacct
tacagcaattatagcactctgccatgccggaagtcccattgcctttctgaaggtgctgca
aacctaaaactgagccataccaacagcatgcatggccgaagagcaaagacaactcaggat
gtaaatacaggaggggaaggcagcgaattcactgacagcggcatagaggctgccaccact
gatacagacattatatccagaagatcaaacattaccacatccagttactctcccacggcc
agccgagtgttcatcgggagcgacagcggcagcagctcgaccggagatgttctgcgtcag
ggcgtctacgagaacttccgccgggagctggagatgagcagggccagtagggagaacttg
gaagaagccagttcggcacttagcgatgaacaaagcagtggcactttaagttcccctggc
cagtcagatattctcctgactgccgcccaggggacggtgcgcaaagctggggctctagca
gtcaagaactttctggtgcacaaaaagaacaagaaagtggaacccgccacgcgcagaaaa
tggaaacagtactgggtctccttaaaaggctgcacgttgttcttttatgagacggacggt
cgatctggaatcgacaacaacagtatccccaagcacgccgtgtgggtggagaacagcatt
gtgcaggccgtgcccgagcacccaaagaaagactttgtcttctgcctgagcaactctctt
ggggacgccttcctttttcagacaaccagccagacggaactagagaactggatcacagcc
atccattcagcctgcgccaccaccgtcgcgaggcagcaccacaaagaggacaccgtcaaa
cttttaaagtcggaaataaagaaacttgagcagaagatcgacatggacgaaaagatgaaa
aaaatgggagaaatgcaaatttcctctgttaccgacgctaaaaagaagaaaaccatcctg
gatcagatctttgtctgggagcagaacctcgagcagttccagatggacctattccggtac
cgctgctatctctccagcctgcaggggggagagctgccaaaccccaaacgccttcttgct
tttgccagccggcccaccaaagtagccatgggccgcctggggatcttttctgtctcctcc
ttccatgctctggtggctgcacgcacaggagagtccggggtaagaaggcggacacaagcc
atgtccagatctgccagcaagaggaggagtcggttttcttctctatgggggctggacaca
tcatctaagaagaaacagggaaggacaagtgttacccaggtgttcagtgacggctctgaa
tcagtcaagaagtccctggaaggcatttttgatgagaccatgtcagaagagaagaaggaa
aaggaggtagcactgagcactgtccatcctcacaatcccgacaccgacatctgggtccat
gactacctgactccatcctgggtttgcctgcccaacgaccagcctgtgcttatagtcata
catcccgatgacatggcaaaggatgccttggagattatatgtaagactcatcagttggat
tacacatcttattatctccgactgaaattcctgatggacaaccagacgcagatctacatc
cccaaacctgaagaggagatctatgagctgctatataaagaaattgaaatctgccccaaa
gtcacgaagcacattcagctggagaagggaggcggtgcgtcggaaagcttcggatttgct
ctctcttcagtggaggaagatggaaggcatcacctttatgtcaataacgttaaggagtcg
ggcttggcatataagaaaggcctgaaggtgggagatgaagtgatggagataaacgccaag
ccagcccgtgagctgaattcttctgtgctaaagaatatcctgtgcaagtcgtccttgtac
ctgactgtgcgcacgtgcccagacgcaggagactgtccgttagaagccctgccccggcgc
tcagacacagactgcaatgactttctcctgctgagcaatcgagattgcagcgagacagac
agctgcagcgagacagccccggaggagatagaagtgcagctggacgcgcccgaagaggcg
gattccattaataaaagcaccgagcaggtcgctgccttgcgtcgcagtccacatgaaatg
aattctcccgactcctgcctgtctccgtccgaattcgccgggccagccctcgccaccatg
agacagctgacagacgccgataaactgcgcaaggtcatatgcgagctcctggagaccgaa
cgcacctatgtcaaggatttaaactgtctgatggaacgctatctgaaacctctgcagaag
gagccgtttctcacccaggacgagctcgacgtgctctttgggaacctcacggagatggta
gaatttcaggtcgagttccttaaaaccctggaagatggggtgagactggttccggacctg
gaaaagctggaaaaagtcgaacaattcaagaaagtgttgttttctctgggcggatccttt
ctgtattatgccgaccgcttcaagctgtacagtgccttctgcgccagtcatacaaaagtc
ccaaaagtattagtcaaagccaagaccgactcaaacttcaaagcgttccttgatgctcag
aatcccaagcagcagcactcctccacgctggagtcctacctgattaagccaatccaacgc
atccttaaatacccgctgctgctcaaagagctctattccttgactgacgctgagagcgaa
gaacattaccatcttgatgtggctattaaaaccatgaacaaagtggccagccacatcaac
gagatgcagaaaattcacgaggaatacggagcagtgtttgatcagcttatatcggaacag
agcggggaagtaaaagaggtggcagacttgtccatgggggacctgcttttacacaacaca
gtcacttggcttaatccacctgcatcgctgggaaagtggaaaaaggaccccgaactggca
acatttgtctttaagactgccgtagtgctggtttacaaggacagctccaagcagaagaag
aagctgggtggctcccatcgagcgtccatgtttgaagatcgggatccgtttcgcttccgt
cacatgattcctaccgaggctttgcaagttcgaaccatgacgacatcagatgccgaaacc
aactctgtctgtgagattgttcatgtgaagtcagagtccgagggacgaccagagagagcc
ttccacttgtgctgcagtaacccaggccgtaagaaggagttcctgagggccgtgcactcc
attctgcgtgacaagcaccggcggcagctgctgaaaaccgaaagcctacccaactcccag
caatacgtcccgtttggagggaagaggctgtgcgcattgaaaggtgcccgtcccaccatg
aaccgagcagtttcagcgcccagcaggtccctcgcccggcgaaggcgtctcgtgagaaac
cgtttcaccatcgactcggacagcatcttctcaaacgaccccgagaaagattccgaccag
gagacggagccttcgccgccccagcagtcgtcgaacagcggcgacacggatcgctgggtg
gaagagcagtttgacctggcgcagtacgaagagcaggacgacgtgaaggagaccgacata
ctgagcagtgacgatgagtactgtgagtccataaaggggggttccatggaaaaggatctg
agcgagcaactggaggccacctctctttctagcaacccaatgggaaccaaagtccagaac
acaatgaatacgcacgcctcccgtatggctcagctgaagaaacagaccgccttttccgga
atgaacggcagcatcgagagcaacacggacgaggtcatatgggtgaaacgggaagacttt
gtacctgtcaggaaactcaacaccgagatctag
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