Xenopus tropicalis (tropical clawed frog): 779491
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Entry
779491 CDS
T01011
Symbol
plxnd1
Name
(RefSeq) plexin-D1
KO
K06822
plexin D
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
779491 (plxnd1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plexin_cytopl
Plexin_RBD
TIG
PSI
Sema
PSI_PlexinA-B
TIG_plexin
TIG_2
Insulin_TMD
CoV_RPol_N
ECSCR
Motif
Other DBs
NCBI-GeneID:
779491
NCBI-ProteinID:
XP_002936302
Xenbase:
XB-GENE-856537
UniProt:
A0A7D9NM50
LinkDB
All DBs
Position
4:complement(131936649..132021504)
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AA seq
1867 aa
AA seq
DB search
MAAAVLLLSLVALASGLELVSKFHSPQVTNNFALSAGEGLLYLAAVNRLYQLNWELRPEL
EDVTGPVPDSPLCHAPQLRETTCDFPRTSTPNYNKILLPDPEQGLLLTCGSIFQGLCELR
ALRNITLRAVPFPVDNAVPSMLNVAANHPNASTVGLLLRGPSGDTKLLVGATYTGYSSQF
FPWNQSIADHRFENSPEISIRALNLTASEKLFTFDISPSDDNIFKVKQSFKARHRLGFVR
AFQQGPFAYLAMNVEPAPAGKENRPSSVLARICLKSEPRTEPRKLTESYIQLGLRCEGPG
GVLYGRLLSVFAESENIFGIFEGKNEAALCMFPLRSVAQEIRGARRGCFESQDAGEVTVL
DSVVQGTGPSCERRNAKVKLQEEQLDCGAAHLQHPLAITRPLPAVPIYKEKGLTSVAVAN
VSGYMVVFLGNVSGHLIKINLDADMKIINKSMQYLEIASGQPVHHVMEFDPMDPTYLFVM
TSHQMTRVKVAECAKYRSCTECLAAADAYCGWCTLEGRCSLQKECQGSEDSAFWMSPNVG
QENMCPAMNSIPNKIDISSSTQRIILQITGNLPILYQMNVSCDYGNNIITPAVIDPDQDS
GQLLHCSFLPRDQFPSFPPNQDYVTVSMALSVGGNSIIQHKFIIYDCNRTQNMHPKNACT
SCVKSRWPCSWCVSQHRCVSSASQCGTIAQNSTESCPRITATSLTPTPTGVTKDYTLSLL
NTNITEGPKLECDFGTEQTFPAKWLNSSAVVCSNVLLYTSERTQSFPINLQLSDHKGLYL
DNPSMLSVEVYNCASQTPDCSSCLGRADLGHHCSWSESSMSCRLNSEILSISYPYTCPAP
DIRKIDPASGPLLGGTLVTIQGRNLGSRFSDINGRVKIGEIECTPIQEKYIVSEEIVCMT
GESPKLLTDWVSVDVNGGGRSKEKYSFQVPEVDYLSPDFGPWAGGTRVTISGTNLNIGRD
VRVLFNKTQECRDLVRTQSTIQCTVPPMKFLPETKVHICVQFEKKSCVKEELFFKYQENP
VIKSMDPRSSPLSGGRIITVTGERFDMVQSIMMGIQHEKGRRMNCTVLSPTIITCPSPTA
PNSTMENMDFFINGVQVDLGKAIVEAHFSLEYQPDPMFYTAKKEKLIKHHVGEPLTLVIH
KEPDNLGLRVDEYRVKVGQIPCESIFIFNDKVIHCSINESLSSSQRYLPVTIQVGKFNQT
ITTLHLAGIDTSIIISIVICSILLLLSVVALFVFCTKSRRAERYWQKTLVQMEEMESQIR
EEIRKGFAELQTDMTDLTKELNRSQGIPFLEYKHFVTRTFFPKCSSLYEERYILPTQNFN
TQLGFQVPETHPLLCGEWKVPENCRTNMEEGITLLSTLLNNRHFLVTFIHAVELQKDFAV
RDRCNLASHLTIALHGKLEYYTSIMKDLLVDLIDSSASKNPKLMLRRTESVVEKMLTNWM
SICMYSCLRETVGEPFFLLLCAIKQQINKGSIDAITGKARYTLNEEWLLRENIEAKPMNL
NVSFQGCGMDSLCVRVLDTDTVSQCKEKILEAFCKNLPYSQWPRVEDVDLEWFASSSKSY
ILRDLDDSSIMEDGKKKLNTLAHYKVHDGASLAMSLKDKRDDTLGRVKDLDTDKYFHLVL
PTDDLAETKRSHRQSHRKKVLPEIYLTRLLSTKGTLQKFLDDLFRAILSIHEDRPPLAIK
YFFDFLEEQAEKRGISDPDTLHIWKTNSLPLRFWVNILKNPEFVFDMDKSDHMDACLSVI
AQAFIDACSISDMQLGKDSPTNKLLYAKEIPEYRKIVQRYYQKIKEMSPLSEQEMNAHLA
EESRKYRNKFNTNVAMAEIYKYAKKYRTQIVTALETNPTTKRGQLQHKFDQVIVLMEDDI
YSCSSEA
NT seq
5604 nt
NT seq
+upstream
nt +downstream
nt
atggctgcagctgtcctgctcctgtcgctggtggcattggcctcagggctagagttggtc
agtaagttccactctccgcaggtcactaataactttgcgctgagcgccggggaggggctg
ttgtacctggcggcggtgaatcgcctctaccagctgaactgggagctgcggccggagctg
gaggatgttaccgggccggtaccggactccccgttgtgccatgctccgcaattgcgagaa
accacctgtgacttcccccggacctcaaccccgaactacaataaaatcctactacccgac
ccggagcaggggctgctactgacctgcggatctatcttccaggggctgtgtgagctccgc
gccctgcggaacataacgctccgcgcagtgcccttccctgtggataacgcggtgcccagc
atgctcaatgtagctgccaaccaccccaacgcttccaccgtagggttactgcttcggggg
cccagtggggacaccaagctgcttgtgggcgctacatacaccggatactccagccagttc
tttccctggaaccaaagtatcgctgaccatcgatttgagaacagccctgagatttcaatc
cgggccctgaacctgaccgcctccgagaagcttttcacttttgacatcagtccgtccgat
gacaacatattcaaggtaaagcagagctttaaggcccggcatcgcctggggtttgtcagg
gcattccagcagggaccattcgcgtacctggccatgaacgtggaacccgcccctgcgggg
aaggagaaccgacccagtagtgttttagcgcggatctgtctgaagtctgagcctagaaca
gagccgcgcaaactcacagagtcctacatccaattgggactgcgctgcgaaggcccagga
ggggtgctgtatggtcgcctgctgtcagtgttcgcggagtcggaaaacatattcgggata
ttcgaggggaaaaatgaggcggcgctctgtatgttcccgctgcgctcggtggcgcaggag
atacgcggggcgcggaggggctgctttgagagtcaggacgcgggggaagtgactgtgttg
gacagtgtggtgcaggggactggccccagctgcgaacgcaggaacgccaaggtcaagctg
caggaggaacaattggactgtggggcggctcatctccaacatccactggccatcacacgc
cctctgcctgccgtacctatctataaagaaaaaggcttgacttctgtagccgtggccaat
gtcagtggttacatggtggtattcctggggaatgtgagcggccatctcatcaagattaac
ctggatgcagatatgaaaattatcaacaaatccatgcaataccttgagatcgctagcggg
cagccagtccaccatgttatggagtttgatcccatggaccccacttacctctttgtcatg
acgtcacatcagatgacgcgagtaaaagtggcagaatgtgccaagtatcggagttgcact
gagtgccttgcggcagcggatgcttactgcgggtggtgcaccctggaaggaaggtgctct
ctccagaaagagtgtcaaggttctgaggattcagcattctggatgagtcccaacgtgggt
caagaaaacatgtgcccagcaatgaacagcattcccaataaaattgatatttcctccagc
acccagagaatcatactccagatcactggaaacctcccaatactttaccagatgaatgtg
tcatgtgactacgggaacaatataatcacgcctgctgttatcgaccctgatcaagacagt
gggcaattgcttcactgctcattccttcccagggaccagttcccatcattcccaccaaac
caagattatgtgacggtcagtatggcgctgtcagtgggaggaaacagcatcattcagcac
aagtttatcatctatgactgcaacaggacgcaaaacatgcatcctaagaatgcgtgcacc
agctgtgtgaagtctcgctggccttgcagttggtgtgtgagccaacacaggtgtgtctcc
agtgcatcacaatgtggcaccattgcacagaacagcacagagagctgtcccaggataacg
gccacaagcctgacccccacacccaccggagtcaccaaggattatacgctatcactgctc
aacacaaatattacagagggcccgaaactggaatgtgacttcggaacagaacaaactttc
ccagcaaaatggttaaattcctccgctgtcgtgtgcagcaatgtactgttgtacacatct
gaaagaacccagagcttcccaatcaacctgcagcttagtgaccataaaggactgtatctt
gacaacccatccatgctctctgtcgaggtgtacaattgcgcttcccagaccccagattgc
tccagctgcttaggccgggcagacctcggtcaccactgctcctggagtgaaagcagcatg
tcatgtcggctgaatagtgaaatactatccatttcatatccatacacctgtcctgctcct
gatataaggaagattgatccagccagtggacccctgttaggcggtactcttgttactatc
caagggcgcaacctcggaagccgcttcagcgatatcaacggaagggtcaagattggagaa
atagagtgcacccccatccaggagaaatacattgtgtctgaggagattgtgtgtatgact
ggagagtctcccaagctgctcactgactgggtctctgtagatgtaaatggaggcggcagg
tccaaggagaaatattctttccaggttccagaggtggattatttatccccagattttggc
ccttgggctggaggaaccagagtaacaatctctggtaccaatctgaatattggcagagat
gtccgagtgctgttcaataagacacaggaatgcagagaccttgtgcgcacacagagcacc
atccagtgtacagttccaccaatgaaatttctccctgaaaccaaggtacacatctgtgtc
cagtttgagaaaaaatcttgtgtaaaggaagaactatttttcaagtaccaagagaaccca
gtgatcaaaagcatggatccaagaagcagccccctcagtggtgggcggatcatcactgtg
accggcgaaagatttgacatggtgcagtctataatgatgggaattcaacatgagaaagga
aggcgaatgaactgcacagtcttaagcccaactataatcacctgcccctcccctacagcc
cccaacagcaccatggagaacatggactttttcattaatggggtgcaagtggatcttggg
aaagctattgtggaagcccatttcagcctggagtatcagcctgacccaatgttctacaca
gccaagaaagaaaagttgattaagcatcacgttggggaaccgctaactctggttatacat
aaagagccagacaaccttggactgagagtagatgaatatcgggtgaaggtcggacagatt
ccatgcgagtcgatctttatctttaatgacaaggtcatacactgcagcatcaatgagtct
ttgagctcctctcagcgctatctacctgtgacgatacaagttggcaaattcaatcagact
atcaccactctgcacctggccgggatagacacatcaatcatcatctccatagtcatctgc
agtatattgttactcctctccgtggtcgctctgtttgttttctgtaccaagagtcgtaga
gctgagcgctattggcagaaaactctcgtacagatggaggagatggaatctcaaatccga
gaggaaatccggaaaggatttgctgagctgcagacagatatgacagacctaacgaaggaa
ttaaatcgcagccaaggaatccccttcctagaatacaaacattttgtcacacgcaccttc
ttcccaaagtgttcatctctgtatgaagagcgctacatcttgcccacacagaacttcaac
acccagcttgggttccaggtgccagagacacatccactactctgtggagagtggaaggtt
ccagaaaactgtcggacaaacatggaggaaggcattaccctactgtccactctgcttaac
aacaggcacttcctggtcacgttcatccatgctgtcgagcttcaaaaggactttgctgtt
cgtgacagatgcaacttggcttctcatctcaccattgctctccatgggaagctggagtat
tatacaagcattatgaaggatcttctggtagatctcatagactcttcagcctccaaaaac
cctaaacttatgctgcgtaggactgagtctgtagttgagaagatgctcaccaactggatg
tccatctgcatgtacagctgcctcagggaaacagtgggggagccatttttcttactgctc
tgtgccataaagcagcaaatcaataagggatccattgatgctatcacaggaaaagcaaga
tacacgctgaatgaggagtggctgcttagagagaacattgaggccaagcctatgaacctc
aacgtgtccttccaaggctgcggcatggactccctgtgtgtgcgtgtgttggacacagac
actgtgagccagtgcaaggagaagatcctggaggctttctgcaagaacctgccctactca
cagtggcctagagtagaggatgtggatttggaatggtttgcctccagctcaaagagttac
atcctgcgagatcttgatgactcctccatcatggaagatgggaagaagaagctgaatacg
ttagcgcactacaaggtccacgatggagcctccctggctatgagcctgaaggacaaaaga
gatgacaccttgggcagagtgaaggacttggacaccgataagtattttcatttagttctt
cccactgatgacttagccgaaacgaaaaggtcccacagacaaagccacaggaaaaaagtt
ctgcctgagatctacttgacccgactcctgtctacaaagggcacgctacagaaattctta
gatgacctattcagagccatcctgagcatccatgaggatcgacccccactagccatcaag
tacttctttgatttcctggaggagcaggctgaaaagcgaggcatatctgacccggacacg
ctacacatctggaaaactaacagccttcctctgcgattctgggtgaacatcctgaagaac
cctgagtttgtgtttgacatggataaatctgatcatatggatgcctgcctgtcagtcatt
gctcaagcgttcattgatgcctgctccatctctgatatgcaactaggcaaggattccccc
accaataagctgctgtacgcaaaagaaattccagaatacaggaaaattgtgcaacgatac
taccagaagattaaggagatgagcccactgagtgagcaggaaatgaatgcgcaccttgcc
gaggagtcacggaaatatcggaataaatttaacaccaacgttgcaatggctgaaatctat
aaatacgccaagaaataccgaacacagattgtcacagctttggaaacaaatcccaccaca
aaaagagggcaactgcaacataaatttgatcaggtgattgtgttgatggaggatgacatt
tactcgtgtagcagtgaggcataa
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integrated database retrieval system
