Xenopus tropicalis (tropical clawed frog): 779824
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Entry
779824 CDS
T01011
Symbol
pcdhga11
Name
(RefSeq) protocadherin gamma subfamily A, 11
KO
K16497
protocadherin gamma subfamily C
Organism
xtr
Xenopus tropicalis (tropical clawed frog)
Brite
KEGG Orthology (KO) [BR:
xtr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
xtr04515
]
779824 (pcdhga11)
Cell adhesion molecules [BR:
xtr04515
]
Cadherins
Protocadherins
779824 (pcdhga11)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_tail
Cadherin_C_2
Cadherin_CELSR2_9th
PepSY
Motif
Other DBs
NCBI-GeneID:
779824
NCBI-ProteinID:
NP_001072371
Xenbase:
XB-GENE-5929299
UniProt:
Q0V9M2
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Position
3:complement(28005051..28269604)
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AA seq
911 aa
AA seq
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MDFQSPGKDWKWQVVYFYFLYSWGWVSGQLRYSIAEESEPGTLVGNVAQDLGLNMADIEK
RRLSLRSGANGRYFFVDQKTGALTVRDRIDRESLCGSSLSCLLPLELGIEKPFELFSVDI
EILDVNDNSPSFLSDNQIIQIIEIFANPGVRFPLDTAEDSDVGINGINQYKINPNPFFSL
SVKNLKDGTLIAELVLEKKLDREEKGQHELLLTAFDGGEQPRSGSTLITIIVLDVNDNAP
VFDQPSYKITLHENLPLTTVVMKLNATDLDEGVNAEISYLFDHHTSTAAKGIFGLNPNTG
EIYIKGFVDFEKTHFYELFVKAVDGGTPRQEGRCLIQVEVEDINDNSPEIIFTSNANEVP
EDAPIGTVVGFITVRDKDSGKNGDVQLGVSPDLPFKIQPFKNRYSLVTSEHLDREKTPQY
TIQLTASDLGSPALSNQTVILLNVSDVNDNRPVFSQSVYNAHIKENIEPGTLLCTVSATD
PDVGSNSDLTYSISESQIDGSSVSSFVFINSNTGDIYAQRSFDYEQFQVLTITARVEDSG
SPKLFSNVSVHIFILDTNDNAPSVLYPGDSKGFIAQEKIPQSASAGYLVTKISAIDPDSG
HNAWLSYRVVEPIGQTLFEISQYTGEIRIIRSFLEIDNTEQHLVISVSDHGEPALSATVT
VIINSVENIAQELPHSQDMIPHSQTSPNLTLYLIISLVAISLVSLITFLILLVKCLKRDN
YGSSCGFCFSSKFQTNHYTDQYKPTLYLNTDGTLKYMEVRMVPPESQGQCYQACFPSASE
RNDFMTPMDIPQQAQPNADWRFSQAAQKPGPSGAQPTEEAGVWPNNQFETERLQAMILAS
ANEAAEGTSGLGGGTGTMGLSARYGPQFTLQHVPDYRQNVYIPGSTLTPTNGAGKREGKG
NKKKSSKKDKK
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atggacttccaaagcccaggaaaggattggaaatggcaagtagtatatttctatttcctt
tatagctggggctgggtctctgggcagcttcgatattctattgcagaggagtcagagcca
ggaacgttggtagggaatgtggctcaggatctggggttaaacatggcagatattgagaaa
cgcagactgagtttaagatctggtgcaaatggcagatatttttttgttgaccagaaaacc
ggagctttgactgtcagagataggatcgacagagagagcctgtgtggttccagcttaagc
tgtttattgcctttggagctaggcattgaaaagccttttgaactgtttagtgtagatata
gaaatattagatgttaatgataactccccctcttttttgtcagataatcagattattcaa
attatagagatatttgcaaatccaggtgttagatttcctttagatactgctgaggattca
gatgtaggaatcaatggtattaaccagtacaagattaacccaaacccattcttttcattg
tctgtaaagaatctgaaggatgggacactcattgcagaattagtacttgaaaaaaaatta
gatcgagaggaaaaggggcaacatgaactattgcttactgcatttgatgggggagaacaa
ccaaggtctggttctaccctaataacaatcatagttctagatgttaatgacaatgcccca
gtgtttgatcagccgagttataaaattactttacatgaaaatcttccattaacaacagta
gtaatgaagcttaatgctacagatctggatgagggagttaatgcagagattagttatctt
tttgatcatcacacatcaactgcagcaaaaggaatatttggtttaaatccaaacacaggg
gaaatatatattaagggatttgtggattttgagaagacacatttttatgagttatttgtc
aaagcagtagatggcggcactccaagacaagagggacgctgcctcattcaagttgaagtg
gaggatataaatgataatagcccagaaattatttttacctctaatgccaatgaagtgcct
gaagatgctcccataggcactgtcgttggatttatcactgtgagagataaagactcagga
aaaaatggagatgttcagttgggtgtatcaccagatttaccttttaaaattcagcccttc
aaaaacagatattcattggtgactagtgaacatttggacagagagaagaccccacaatat
actattcaacttacagcttctgatttaggttctcctgctttaagtaatcagactgtgata
ctgctaaatgtttcagatgttaatgataatcgcccagtcttttctcagtctgtttacaat
gctcatataaaggaaaacattgaacctggtactttattatgtactgtctctgccactgat
ccagatgttggatcaaattctgatctgacttattcaataagtgaaagtcaaattgatggc
tcttctgtatcttcatttgtgttcatcaattccaatactggggatatttatgcccagcgt
tcttttgactatgaacaatttcaagttcttactataactgccagagtggaagattctgga
tctccaaaattattttcaaatgtgtctgtgcacatatttattttggatacaaatgataat
gctccctcggtgctgtatccaggggattcaaagggatttatagcccaagagaagattccg
caatctgcttctgctggttatttggttaccaaaatatctgcaatagatcctgactcagga
cacaatgcctggcttagctacagggtggttgaacccataggtcaaactttatttgagatt
tctcagtatacaggagaaataaggataattcggagtttccttgaaattgataatactgag
cagcaccttgtcatttcagtcagtgaccacggggaaccagcattatcagcaactgttaca
gtgattataaattctgttgaaaacattgcccaagagttaccacattctcaggacatgata
ccacattctcaaacatccccaaatttgactttgtatttaatcatttcactggttgccata
agtttagtttcccttattactttccttatcttgcttgtgaaatgcttaaaaagggacaat
tatggaagcagctgtggattttgtttttcaagcaaattccagaccaaccattacacagac
cagtataaaccaactctttacctgaacacagacgggactttaaaatacatggaagtgagg
atggttcccccagagtcacaagggcagtgttatcaagcttgtttcccttctgcttctgaa
agaaacgattttatgacacctatggatattccccagcaggcgcaacctaacgcagattgg
cggttctcccaggctgctcagaaacccggacccagtggggctcagcccacagaggaagct
ggtgtgtggccaaataaccaatttgaaacagagagacttcaagcaatgattttggcatct
gcaaacgaagctgctgagggaacatctggcctcggaggtggaacaggaacaatgggactc
agtgcccgctatggacctcagttcaccctgcagcatgtccctgactacagacagaatgtt
tacattccaggaagcacactgactcccactaatggagcaggaaagcgggaaggaaaagga
aacaaaaagaaatccagcaaaaaggataagaagtaa
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