Xanthomonas vesicatoria: BJD12_16860
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Entry
BJD12_16860 CDS
T04741
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
xve
Xanthomonas vesicatoria
Pathway
xve00300
Lysine biosynthesis
xve00550
Peptidoglycan biosynthesis
xve01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
xve00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
BJD12_16860
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
BJD12_16860
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
xve01011
]
BJD12_16860
Enzymes [BR:
xve01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
BJD12_16860
Peptidoglycan biosynthesis and degradation proteins [BR:
xve01011
]
Precursor biosynthesis
Amino acid ligase
BJD12_16860
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
APP76618
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All DBs
Position
3894619..3896106
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AA seq
495 aa
AA seq
DB search
MSRSMPLSQLLPDLTLARDVQVSGLVMDSRAVRPGDAFVAIAGFGAHGLGFVEQARANGA
VAVLFEPPAPAELPVPADAIAVPGLRARLGSMADQFHGHPSRALRMVGVTGTNGKTSTVQ
LLAQALTLLGTSTGTLGTLGVGLYGAAVPTGFTTPLVLSTHALLAQLRDEGAQAAAMEVS
SHALDQGRVDAVHFDVAVFTNLTRDHLDYHGDMAQYGAAKAKLFTRAGLQAAVVNLDDAF
GRTLFASLDPALRAIGVSSRGQGGATVRADALQLDHNGISFALRIDSTVHAVHSPLLGRF
NVDNLLAVAGALHALDHAPAQIAQVLGQLQPIHGRMNRLGGAHGAPLVVVDYAHTPDALE
QALASLRSHAQDRLICVFGCGGERDTGKRPQMAAIAELNADVAIVTDDNPRGEDGDVIVA
DIVRGFARPDAAIVQRDRAAAIHQAIAMASASDIVLIAGKGHEPYQEVAGVRHAFDDAAV
AAQALLPRTLLGVRA
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
gtgagccgcagcatgccgctgtcgcagctattgccggacctgacgcttgcgcgcgatgtg
caggtgtccggcctggtgatggatagccgtgcggtgcgtccgggcgatgcgttcgtggcg
atcgccggcttcggcgcgcatgggctgggctttgtcgaacaggcgcgtgcgaatggcgca
gtggcagtgttgttcgaaccaccggcgccggccgagctgccggtaccggccgatgcgatc
gcggtgcccggcctgcgtgcgcgactcggcagcatggccgaccagttccacggtcacccg
tcgcgcgcgctgcgcatggttggcgtcaccgggaccaacggcaagacctccaccgtgcaa
ttgctggcgcaggcgctgaccttgctcggtacatcgaccggtacgctgggcacgttgggc
gtgggcctgtacggcgcggccgtgccgaccggcttcaccacaccgctggtgctgtccacg
catgccttgctggcgcaactgcgcgatgaaggcgcgcaggccgcggcgatggaagtcagc
tcgcacgcgctcgatcagggccgcgtggatgccgtgcatttcgacgtagcggtgttcacc
aatctcacccgcgatcatctcgattatcacggcgatatggcgcagtacggcgccgccaaa
gccaagctgttcacgcgcgctgggttgcaggcggcggtggtaaatctggacgacgcattc
ggccgcacgctgttcgcgtcgctcgatcctgcgctgcgtgcgatcggtgtgagttcgcgc
gggcagggcggcgccacggtgcgcgccgacgcgctgcagctggatcacaacggcatcagc
ttcgcgctgcggatcgatagcaccgtccacgcggtacattcgccactgctgggccgcttc
aacgtcgacaacctgctggcggtcgccggtgccctgcacgcgctggaccatgcgccggcg
cagatcgcccaggtgctgggccagctgcagcccatccacggccgcatgaatcgtctcggc
ggcgcgcatggcgcaccgctggtcgtggtcgactacgcacacacgcccgacgcgctggag
caggcactggccagcctccgctcgcatgcgcaggaccggctgatctgcgtgttcggctgt
ggcggggaacgcgacaccggcaagcgcccgcagatggccgccattgccgaactcaacgcc
gatgtggcgatcgtcaccgacgacaacccgcgcggcgaagatggcgatgtcatcgttgcc
gatatcgtgcgcggctttgcgcgcccggatgcggccatcgtgcagcgcgatcgtgctgcc
gccatccatcaggccatcgctatggccagcgcatcggacatcgtgctgatcgccggcaag
ggccacgagccctaccaggaagtggctggcgtgcggcatgccttcgacgacgcggcggta
gcggcgcaggcgctgctgccgcgtaccctgctgggggtgcgcgcatga
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