Xylanimonas protaetiae: ET471_04825
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Entry
ET471_04825 CDS
T05815
Symbol
rlmC
Name
(GenBank) 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC
KO
K03212
23S rRNA (uracil747-C5)-methyltransferase [EC:
2.1.1.189
]
Organism
xya
Xylanimonas protaetiae
Brite
KEGG Orthology (KO) [BR:
xya00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xya03009
]
ET471_04825 (rlmC)
Enzymes [BR:
xya01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.189 23S rRNA (uracil747-C5)-methyltransferase
ET471_04825 (rlmC)
Ribosome biogenesis [BR:
xya03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
ET471_04825 (rlmC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_25
MTS
Methyltransf_11
Methyltransf_31
Methyltransf_15
Motif
Other DBs
NCBI-ProteinID:
QAY69445
UniProt:
A0A4P6F2P6
LinkDB
All DBs
Position
1070264..1071520
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AA seq
418 aa
AA seq
DB search
MQCHHYDAGRCRSCTLLEVAYPTQVTDKEHHVRELLDPLAPGARWLPPVTSAEGGFRNKA
KMVVTGTVEEPVIGILGALPADAAPTGVDLTDCPLYPPALQEAFGPLAELVTRARLQPYD
LTPARGRVTPRDAARRGELKHLLVTVSPAGELMVRLVLRSQEPVARLRKHLPWLQASLPA
LAVLSVNVQPEHKAVLEGDVEIVLTDRETLPMTLDVLPGGLTLHLRPQSFFQTNTDVAAA
LYRQAKEWVDAVAPASVWDLYSGVGGFALTCAAPGRRVTGIEISAEAVASAQVTRAELEA
TDRGLAAMTGVRFAAADATAFALGSDPADVPELVVVNPPRRGIGPELADWLEAAPAGGRN
PRSARWVLYSSCNAVTLAHDLERMPSLRPTQVRLLDMFPQTRHYEVLTLLERAPLERA
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
gtgcagtgccaccactacgacgccggacggtgccgctcgtgcacgctgctcgaggtcgcc
taccccacgcaggtgaccgacaaggagcaccacgtgcgcgagctgctcgacccgctcgcc
cccggcgcgcggtggctgccgcccgtcacgagcgccgagggcgggttccgcaacaaggcc
aagatggtggtcacgggcacggtcgaggagcccgtcatcggcatcctcggggcgctgccc
gccgacgccgcaccgacgggcgtcgacctcaccgactgcccgctctacccgcccgcgctc
caggaggcgttcggcccgctggccgagctcgtcacgcgcgcccggctccagccgtacgac
ctgacgcccgcgcgcggccgggtcacgccgcgcgacgccgcgcgacgcggcgagctcaag
cacctgctcgtgaccgtctcccccgccggcgagctcatggtgcggctggtgctgcgctcg
caggagcccgtggcccggctgcgcaagcacctcccctggctccaggcgtcgctgcccgcc
ctggccgtgctctccgtcaacgtccagcccgagcacaaggcggtgctcgagggcgacgtc
gagatcgtgctcacggaccgcgagacgctgcccatgacgctcgacgtcctgcccggcggg
ctcacgctgcacctgcgcccgcagagcttcttccagaccaacaccgacgtcgccgccgcg
ctctaccggcaggccaaggagtgggtcgacgccgtcgcgcccgcgagcgtctgggacctg
tacagcggggtcggcggcttcgcgctcacgtgcgcggcaccgggacgccgcgtgaccggc
atcgagatctccgccgaggcggtggcgtccgcgcaggtcacgcgcgccgagctcgaggcg
accgaccgcgggctcgccgcgatgacgggcgtgcggttcgccgcggcggacgcgacggcc
ttcgcgctcggctccgaccccgcggacgtgcccgagctcgtggtggtcaacccgccgcgg
cgcggcatcgggccggagctcgcggactggctggaggcggcccccgccggcgggaggaac
ccccggtcggcgcgctgggtgctctactcgagctgcaacgccgtcacgctcgcgcacgac
ctggagcgcatgccgtcgctgcggcccacccaggtgcggctgctcgacatgttcccgcag
acgcggcactacgaggtgctcacgctcctggaacgggcgcccctggaacgggcgtag
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