Xylophilus rhododendri: GT347_18225
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Entry
GT347_18225 CDS
T06383
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
xyk
Xylophilus rhododendri
Pathway
xyk00300
Lysine biosynthesis
xyk00550
Peptidoglycan biosynthesis
xyk01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
xyk00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
GT347_18225
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
GT347_18225
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
xyk01011
]
GT347_18225
Enzymes [BR:
xyk01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
GT347_18225
Peptidoglycan biosynthesis and degradation proteins [BR:
xyk01011
]
Precursor biosynthesis
Amino acid ligase
GT347_18225
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
ETF
Motif
Other DBs
NCBI-ProteinID:
QHI99744
UniProt:
A0A857J6X2
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All DBs
Position
3938381..3939892
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AA seq
503 aa
AA seq
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MVASDISLQQLNGAADAVAWLRARVTGTLRIDSREVQSGDGFIAWPGAAVDGRAFVADAF
ARGAAACLVEREGVEAFEFASREVATCAGLKAATGRIAGDWFGAPSEGLDVLAVTGTNGK
TSTAWWLALALARTGRGCGLIGTLGTGVPPQVVANGLTTPDPVLLQRVFRQFDDQGLAAC
AIEASSIGIAERRLDGSRIRVALFTNFTLDHLDYHGSMAAYWAAKAELFAWPGLQAAVVN
IDDAHGAALAAQLTVDLWTYSADGSADARLRAEDIGHGETGGLRFTVVEGEQRCLLQAGA
IGRFNISNLLAVVGGQRALGVPLDEAVAACADLAPVPGRMERIARAGQPLVAVDYAHTPD
ALEKALAALRPLAESRGGELVCLFGCGGGRDQAKRPVMASIAAHGADRIWLTSDNPRHED
PAAIVAQAAAGLPEGAPYRIEIDRAAAIAQAIAQAGPQDVVLVAGKGHETYQEVAGRRLP
FSDREQVETALDQRAASLPPSAH
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atggtcgcctccgacatctcgctgcagcagctgaacggcgccgccgacgcggtcgcctgg
ctgcgcgcgcgggtcaccggcacgctgcgcatcgacagccgggaagtccagtccggcgac
ggcttcatcgcctggcccggcgcggcggtcgatggccgggccttcgtggccgatgccttc
gcacgcggcgcggccgcctgcctggtcgagcgcgagggtgtcgaggccttcgaattcgca
agccgcgaagtggccacctgcgctggcctcaaggccgccaccggccgcatcgctggagac
tggttcggcgcgcccagcgaaggcctggacgtgctggccgtcaccggcaccaacggcaag
accagtaccgcctggtggctggccctggcgctggcccgcaccggccgcggctgcggcctg
atcggcaccctgggcaccggcgtgccgccgcaggtggtcgccaacggcctgaccacaccc
gacccggtgctgctgcagcgggtgttccgccagttcgacgaccagggcctggccgcctgc
gccatcgaggcctcctccatcggcatcgccgaacggcggctcgatggcagccgcatccgc
gtggccctgttcaccaatttcacgctggaccacctggactaccacggcagcatggccgcc
tactgggccgccaaggccgagctgttcgcctggccgggcctgcaggcggccgtggtcaac
atcgacgacgcccatggcgccgccctggccgcgcagctgacggtggacctgtggacctat
tcggcggacggctcggccgacgcccgcctgcgcgccgaggacatcggccatggcgagaca
ggtggcctgcggttcacggtggtcgaaggcgaacagcgctgcctgctgcaggccggcgcc
atcggccgtttcaatatcagcaacctgctggcggtggtcggcggccagcgtgcgctgggc
gtgccgctcgatgaggccgtggccgcctgcgccgacctggccccggtgcccggccgcatg
gaacgcatcgcccgcgccgggcagccgctggtggccgtcgattacgcccacacacccgac
gcgctggaaaaagccctggccgccctgcgcccgctggccgaatcgcgcggcggcgaactg
gtctgcctgttcggctgcggcggcgggcgcgaccaggccaagcgcccggtgatggcctcc
atcgccgcccacggcgccgaccgcatctggctgaccagcgacaacccgcgccacgaagac
cccgccgccatcgtggcgcaagccgccgccggcctgcccgaaggcgcaccctatcgcatc
gagatcgaccgcgccgcggcgatcgcccaggccatcgcccaggccggcccgcaggacgtg
gtcctggtcgccggcaagggccacgaaacctatcaggaagtcgccggacggcgccttccc
ttttccgaccgcgagcaggtcgagaccgcgctggaccagcgtgccgcctccctgccgccc
tcggcccactga
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