Xylophilus rhododendri: GT347_22480
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Entry
GT347_22480 CDS
T06383
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
xyk
Xylophilus rhododendri
Pathway
xyk01501
beta-Lactam resistance
xyk01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
xyk00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
GT347_22480
01503 Cationic antimicrobial peptide (CAMP) resistance
GT347_22480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xyk03036
]
GT347_22480
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xyk02000
]
GT347_22480
01504 Antimicrobial resistance genes [BR:
xyk01504
]
GT347_22480
Chromosome and associated proteins [BR:
xyk03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
GT347_22480
Transporters [BR:
xyk02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
GT347_22480
Antimicrobial resistance genes [BR:
xyk01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
GT347_22480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Biotin_lipoyl
Motif
Other DBs
NCBI-ProteinID:
QHJ00498
UniProt:
A0A857J9U3
LinkDB
All DBs
Position
complement(4852235..4853353)
Genome browser
AA seq
372 aa
AA seq
DB search
MAAPFLVAGVLVALLLPARIHAQAGLRQQTQAQALTPVAVVHAQTGPATRELLLPARVMA
FADTPIYARTSGYVKRWTVDIGAPVKAGQLLAEIEAPELDDSLRQAQAAQVRAVADADLA
RVTAERWQALGSTEAVTRQEIDQKVADAQAKAALVAQAQADVARLGKTASYKQVLAPFDG
VVTARNLEVGTLINAGSSAASAGVELFHIASSSRLRIAADVPEADAYAATVGQPATVEAP
DQPGRMLAGTISRRAEAIDPVARTLHVEVDVDNREHVFLPGSFAQVRFRLADNQPRLSLP
STALLMRPEGVRVAVVRADNTIALQPVRLGRNSGTQVQVLEGLTPAMAVVLNPPDSLLAG
QAVQVVTPQAGA
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgcccttcctggtggcaggcgtgctggtggcgctgctgctgccggcccgcatc
cacgcgcaggcgggactgcgccagcagacgcaggcccaggccctaaccccggtggcggtg
gtgcatgcgcaaaccggcccggcgacacgcgagctgctgctgccggcgcgtgtcatggcc
ttcgccgacacgccgatctatgcgcgcaccagcggctatgtgaaacgctggaccgtcgac
atcggcgccccggtcaaggccggccaactgctggccgagatcgaggcgcccgaactcgac
gacagcctgcgccaggcgcaggcggcgcaggtccgcgccgtggccgatgccgacctggcc
cgtgtcaccgccgagcgctggcaggcgctgggcagcaccgaagcggtgacccggcaggag
atcgaccagaaggtggccgacgcgcaggccaaggccgcattggtggcgcaggcccaggcc
gacgtggcccgcctgggcaagaccgcctcgtacaaacaggtgctggcgcccttcgacggc
gtggtgacggcgcgcaacctggaggtgggcacgctgatcaacgccggcagctcggccgcc
agcgcgggcgtggagctgttccacatcgcatcgtcgagccgactgcgcatcgccgccgac
gtgcccgaggccgacgcctacgccgccaccgtcggccagcccgccacggtggaggcgccc
gaccagcccggccgcatgctggccggcaccatcagccggcgcgccgaggcgatcgacccg
gtggcccgcaccctgcacgtggaggtggacgtggacaaccgcgagcatgtcttcctgccc
ggcagcttcgcccaggtgcgcttccgtctggcagacaaccagccccggctcagcctgccc
tccaccgccctgctgatgcggcccgaaggcgtgcgggtggcggtggtgcgggccgacaac
accatcgccctgcagccggtgcggctgggccgcaacagcggcacccaggtgcaggtgctg
gagggcctgacgcccgccatggcggtggtgctgaacccgccggattccctgctggccggc
caggccgtgcaggtcgtcacgccccaggcgggagcttga
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