KEGG   Yoonia algicola: AABB28_05850
Entry
AABB28_05850      CDS       T10512                                 
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
  KO
K03585  membrane fusion protein, multidrug efflux system
Organism
yag  Yoonia algicola
Pathway
yag01501  beta-Lactam resistance
yag01503  Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:yag00001]
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01501 beta-Lactam resistance
    AABB28_05850
   01503 Cationic antimicrobial peptide (CAMP) resistance
    AABB28_05850
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:yag03036]
    AABB28_05850
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:yag02000]
    AABB28_05850
   01504 Antimicrobial resistance genes [BR:yag01504]
    AABB28_05850
Chromosome and associated proteins [BR:yag03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Divisome proteins
    AABB28_05850
Transporters [BR:yag02000]
 Other transporters
  Accessory factors involved in transport [TC:8]
   AABB28_05850
Antimicrobial resistance genes [BR:yag01504]
 Gene sets
  Multipdrug resistance modules
   Multidrug resistance, efflux pump MexAB-OprM [MD:M00718]
    AABB28_05850
SSDB
Motif
Pfam: Beta-barrel_RND_2 BSH_RND BSH_CzcB BSH_CusB YknX_C HH_AprE Biotin_lipoyl HH_EMRA RND-MFP_C Beta-barrel_RND BSH_YknX HH_MFP_RND OEP BSH_LcnD HH_CzcB Beta-barrel_YknX CzcB_C MscS_porin
Other DBs
NCBI-ProteinID: WZU64800
UniProt: A0AAN0NI37
LinkDB
Position
1183638..1184906
AA seq 422 aa
MSPETNKITPADQKSAQTKQPSAKPDWAKSDSQLGREARMAAGQPSRRRRWPWVAGLVVL
AAVAGGYYYYDAQFAPQATAVAPVDVAEPVQAAMQINPDEMGVLQPQRLERRVRVSGTLA
PWRSTQLSSQTGGEIEDVTVRPGDTVEAGDLLVQIDTENLLLELDQARSNVAATRAQLAL
AEVQLDRIRALVDRGVTTSSSLDEAQSSVTQLNASLDALDDQVAGAELRLRNATVRAPFS
GIVSSRAIEPGQYVGVGTPLISIVDLSTVEMRANAAVADGALLQRDQSVIISVDGVEGRS
FEGRVARINPVAEEGTRTIPVYVMIENPDGILLGGMFASAQVVVDAVEDAIAMPTRALRE
DVEGAYVLRIEGDALVRQAIETGGTWGGRLTQITSGLETGQRVVTAPLPALQPGDTVALV
EN
NT seq 1269 nt   +upstreamnt  +downstreamnt
atgagccccgagacaaacaaaatcacccccgcagatcagaaatctgcacagaccaaacag
cccagcgcaaagccggactgggccaaatccgacagccaactcggccgcgaggcgcgcatg
gcggcgggccaaccgagccgccgtcgtcgctggccatgggtggcggggcttgttgttctg
gcagcagtggcaggcgggtattattattacgacgcacagtttgcgccgcaggccaccgcg
gttgctccggtggacgtcgcggaaccggtccaggccgcgatgcagatcaaccctgatgaa
atgggggtgttacagccgcaacgtctggaacgccgtgtgcgggtatcgggcacattggcg
ccttggcgcagcacgcaactttcgtcccagacgggtggagagattgaggacgtcacggtg
cgtcccggcgacactgtggaggccggagacctcttggtccagatcgacaccgagaacctt
ttgctggagctggatcaggcccgcagcaacgtcgcagccacgcgggcgcaactggcgctt
gccgaagttcaactcgaccggatccgcgcgcttgtcgacaggggtgtcacaacgtcctcc
agcctcgatgaagcccaaagcagtgtcacgcaattgaatgcgagccttgatgcgcttgat
gatcaggtcgcgggggcagagctgcgtttgcgcaacgcaacggtccgcgctccgttttct
ggcatcgtctccagccgcgcgatcgagccggggcaatatgttggtgttggtacaccgctg
atcagcatcgtggacctttcaaccgtcgaaatgcgcgccaacgccgccgttgccgacggg
gcgctgttgcaacgcgaccaatcggtcatcatcagcgtggacggcgtcgaaggccgcagc
tttgaaggccgtgtggcgcggatcaatccggtcgccgaagaaggcacacgcacgatcccc
gtttacgtgatgatcgagaaccctgacggtattctgctcggaggaatgttcgcctcggcg
caagtggtcgtcgatgccgttgaggatgcgattgccatgccgacacgcgcgctgcgcgaa
gatgtggaaggtgcctacgtcctgcgcatcgaaggggatgctcttgtgcgtcaagccatc
gagacaggcgggacatggggcggacggctcacccagatcacttcgggccttgagacagga
caaagggtcgtgacggcccccctgcccgcgctgcaacccggcgacaccgtcgcactcgtg
gagaattga

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