Yersinia canariae: F0T03_13465
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Entry
F0T03_13465 CDS
T06446
Symbol
lpxC
Name
(GenBank) UDP-3-O-acyl-N-acetylglucosamine deacetylase
KO
K02535
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:
3.5.1.108
]
Organism
yca
Yersinia canariae
Pathway
yca00540
Lipopolysaccharide biosynthesis
yca01100
Metabolic pathways
Module
yca_M00060
KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type
Brite
KEGG Orthology (KO) [BR:
yca00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
F0T03_13465 (lpxC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
yca01005
]
F0T03_13465 (lpxC)
Enzymes [BR:
yca01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
F0T03_13465 (lpxC)
Lipopolysaccharide biosynthesis proteins [BR:
yca01005
]
Lipid A
F0T03_13465 (lpxC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LpxC
CHMI
Motif
Other DBs
NCBI-ProteinID:
QHB33071
UniProt:
A0A857F145
LinkDB
All DBs
Position
complement(2859414..2860325)
Genome browser
AA seq
303 aa
AA seq
DB search
MMRQKTIQKAVQMCGVGLHSGRKVNMRLLPADSNTGIVFRRVDLSPVVDIPLCAKRVNDT
VLATSIFNADGIRVSTVEHLLSAISGLGIDNLVIEIDAPEIPIVDGSANPFTFMLLSCAG
LVKQKAAKKIFKIKEMVRVTDGDKWAMLEPANYLSLDFSIDFQHPIIVSSDQRFSITLTP
ETYVSELSRARTFGFIKDIEYLQKKGLCLGASLDNAIGLDEYRVVNEEGLRYRNEFVRHK
ILDAIGDLFVCGHSILGAFTAYKSGHALNNKLINTVLERSTAWELMTFEDENLNPNFSTP
LLV
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgatgagacaaaaaaccattcaaaaagcggtgcaaatgtgcggtgttggtctacatagt
ggcagaaaagtcaatatgagattgttgccagcggattcaaatacaggaatagtttttcgt
cgggtggatctttcacctgttgttgatattcctttatgtgcgaaacgagtaaatgatacc
gttctggcgaccagcatttttaatgctgatgggatacgtgtttcaaccgttgagcatttg
ttgtctgctatttcggggctagggatagataatttagttatagaaattgatgcaccagag
atcccaatcgttgatggtagcgctaacccttttacttttatgcttctcagttgtgccggt
ttggtaaagcaaaaggctgcaaaaaaaatttttaaaattaaagagatggtacgcgttact
gacggtgataagtgggcaatgctggagcctgctaattatttaagcctcgatttctcaata
gattttcaacatccaatcatagtatcaagcgatcagcgattttcaataacgctcacccca
gagacctatgtttctgagttatccagagcccgaacctttggatttataaaggatattgag
tatttacaaaagaagggactgtgtctcggcgctagtctggataacgcaatagggttggat
gagtatcgggtagtgaacgaagaagggcttcgctatagaaatgagtttgtccgacataaa
attcttgatgcaataggtgatttgtttgtttgtgggcatagcattttgggagcattcact
gcgtataaatctggtcatgcgttgaataataagttaattaatacggtgcttgagcggtca
actgcatgggagttaatgacgtttgaagatgagaatctaaacccaaatttttctacaccg
ttgttggtttga
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