Yersinia canariae: F0T03_16125
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Entry
F0T03_16125 CDS
T06446
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
yca
Yersinia canariae
Pathway
yca01501
beta-Lactam resistance
yca01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
yca00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
F0T03_16125
01503 Cationic antimicrobial peptide (CAMP) resistance
F0T03_16125
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
yca03036
]
F0T03_16125
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
yca02000
]
F0T03_16125
01504 Antimicrobial resistance genes [BR:
yca01504
]
F0T03_16125
Chromosome and associated proteins [BR:
yca03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
F0T03_16125
Transporters [BR:
yca02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
F0T03_16125
Antimicrobial resistance genes [BR:
yca01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
F0T03_16125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CusB_dom_1
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Motif
Other DBs
NCBI-ProteinID:
QHB33530
UniProt:
A0A857F1Y2
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All DBs
Position
3420652..3421839
Genome browser
AA seq
395 aa
AA seq
DB search
MSKNRGVMPLAAILVLSGSLVLIGCNDKDAAQAHAQQAPEVGIVTLKAAPLNITTELPGR
TSAFRVAEVRPQVSGIILKRNYVEGSDVTAGTSLYQIDPATYQAAYDSAKGDLAKAQAAA
EIARLTVNRYKPLLGTNYISKQEYDQAVSDSMQANASVLAAKAAVETARINLAYTQVTSP
ISGRTGKSSVTEGALVTSGQATAMTTVQQLDPMYVDVTQSSDEFLRLKKELTDGTLKQEN
GKAKVRLLLENGTEYAETGTLEFSGVTVDETTGSITIRAIFPNPNEALLPGMFVRARLDE
GVRPDALLVPQQGITRNPRGEATAMVVGADDKVELRTLVANQAIGDKWLVTEGLKAGDRV
IVSGLQKIRPGVQVKVQEATASAPKEAPADTAKKS
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaaacagaggggtaatgcctctggctgcaattctggtactttcaggcagctta
gtacttataggatgtaatgacaaagatgcggcgcaagcccatgctcaacaggcacctgaa
gtcggcattgtgacgttgaaagctgcaccactgaatatcacaaccgaattgcctggccgc
acgtccgcattccgtgttgcagaagttcgtccgcaagttagcggtattatccttaaacgt
aactatgttgaaggcagtgatgtcaccgccggaacatcactttatcaaattgatcctgcg
acctatcaggccgcttatgacagcgcaaaaggtgatttagctaaagcacaagcagcggct
gaaatcgcccgtctgaccgtgaatcgctacaaaccattgctgggcacgaactacatcagt
aagcaagagtatgaccaagcggtgtctgattctatgcaagccaatgcttccgttctggcg
gcaaaagcagcggtagaaactgctcgtattaatctggcttatacccaagtcacctcgcca
atcagcgggcgtaccggtaaatcttcagtgactgaaggtgcattggtgaccagtggtcag
gcaactgcaatgactaccgtccaacaacttgacccgatgtacgttgatgttactcagtca
agcgatgagttcctgcgcctgaaaaaagagctgacagatggcacgctcaaacaagaaaac
ggtaaagctaaagttcgcttgttgctggaaaacggcactgaatatgcagaaaccggcacc
ttagaattctctggtgtgaccgtggatgaaaccaccggttctattactatccgcgccatt
ttccctaacccgaatgaagcgttgttaccagggatgtttgttcgcgcccgtctggatgaa
ggtgtccgtcctgatgcactgttagtgcctcagcaaggtataacccgtaacccacgtgga
gaagctaccgcgatggttgttggtgcagatgacaaagttgagttgcgcacgttagttgct
aaccaagctattggtgacaaatggttggtcactgaagggttgaaagcaggtgatcgcgtt
attgtttccggcttgcagaaaatcagaccgggcgtacaggtaaaagtgcaggaagctacg
gcgtcagcaccaaaagaagccccagctgatacagcgaagaagtcttaa
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