Yersinia canariae: F0T03_16130
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Entry
F0T03_16130 CDS
T06446
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
yca
Yersinia canariae
Pathway
yca01501
beta-Lactam resistance
yca01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
yca00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
F0T03_16130
01503 Cationic antimicrobial peptide (CAMP) resistance
F0T03_16130
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
yca02000
]
F0T03_16130
01504 Antimicrobial resistance genes [BR:
yca01504
]
F0T03_16130
Transporters [BR:
yca02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
F0T03_16130
Antimicrobial resistance genes [BR:
yca01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
F0T03_16130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
MMPL
Motif
Other DBs
NCBI-ProteinID:
QHB33531
UniProt:
A0A857F2D5
LinkDB
All DBs
Position
3421856..3425008
Genome browser
AA seq
1050 aa
AA seq
DB search
MAKFFIDRPIFAWVLAIILMLAGILAIMKLPVAQYPTIAPPAISISANYPGADATTVQNT
VTQVIEQNMNGIDNLLYMSSSSDSSGNVQITLTFNSGTDPDIAQVQVQNKLQLAMPLLPQ
EVQQQGVSVEKSSSSFLMVAGFISEDGTMLQEDIADYVGSNVKDPISRTAGVGDVQLFGS
QYAMRIWMDPHKLNNYNLTPVDVINAIKVQNNQVAAGQLGGTPPVPGQQLNSSIIAQTRL
TSAEEFSKIMLKVNTDGSQVRLKDVAIVQLGAENYNVIARYNGKPAAGIGIKLATGANAL
NTSAAVKAELAKLQPFFPAGLKVVYPYDTTPFVKISINEVVKTLVEAIILVFLVMYLFLQ
NFRATLIPTIAVPVVLLGTFAILSALGYSINTLTMFGMVLAIGLLVDDAIVVVENVERVM
QEEGLPPKEATKKSMEQIQGALVGIAMVLSAVFIPMAFFGGATGAIYRQFSITIVSAMVL
SVLVALILTPALCATMLKPIAKGEHGPKTGFFGWFNRMFDKSTHHYTDSVANILRSTGRY
LVIYLAIVIGMGVLFLRLPSSFLPEEDQGVFLTMVQLPAGATQERTQKVLNQVTDYYLDK
EKDVVNSVFTVNGFGFSGQGQNTGLAFVSLKNWDERPGEQNKVPAIVGRASAAFSQIKDG
LVFAFNLPAIVELGTATGFDFQLIDQGNVGHQKLTEARNQLLGMAAQHSDMLVGMRPNGL
EDTPQFKVEVDQEKAQALGVAISDINTTLGSAMGGSYVNDFIDRGRVKKVYVQADAPFRM
LPDDIDKWYVRNSSGQMVSFATFSSAKWEYGSPRLERYNGLPSMEILGQAAPGKSTGEAM
DLMQELAAKLPSGVGYDWTGMSYQERLSGNQAPALYAISLIVVFLCLAALYESWSIPFSV
MLVVPLGVVGALLAASLRGLNNDVYFQVGLLTTIGLSAKNAILIVEFAKDLMDKEGKGLV
ESTLEAVRMRLRPILMTSLAFILGVLPLVISSGAGSGAQNAVGTGVMGGMITATVLAIFF
VPVFFVVVRRRFSRKSEDVEHAHAVDHKVK
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atggctaagttctttatagatcgccccattttcgcttgggttctggctatcattctgatg
ttggccggtatcctcgcgataatgaaattacccgttgcgcaatatccgaccattgcgcca
ccggcaatttcaatctccgccaactaccctggcgccgatgcgactactgttcagaataca
gtaacgcaggttatcgaacagaacatgaacggtatcgataacttgctgtacatgtcttcc
agcagtgactcatccggtaacgttcagataacgttgacctttaactcaggcactgacccg
gatattgctcaggttcaggtccagaacaaactgcaattagccatgccattattgccgcaa
gaagtgcagcaacaaggtgtgagtgttgaaaagtccagtagtagcttcctaatggttgcc
ggttttatttctgaagacggcaccatgctacaagaagatatcgctgactatgtaggttct
aacgttaaagatcccatcagccgtaccgcgggtgtaggtgatgttcagctattcggttcc
cagtacgcgatgcgtatctggatggatccgcacaaactgaataactacaacctgacgccg
gttgatgttatcaatgctattaaagtccaaaataaccaagtagccgcgggtcagttaggt
ggaacaccaccggtaccaggccagcaactgaactcatctatcattgcgcagacacgttta
accagcgcggaagagttcagcaaaataatgctgaaagtgaatacagatggttcgcaggtt
cgcctaaaagatgtggcaatcgtgcaactgggggctgaaaactataacgtcattgcccgc
tataacggtaaaccggcagcgggtattggtatcaagctggcgacaggggctaacgccctg
aacacctctgcggcagtaaaagcggaactggccaaattacagccgttcttccctgctggc
ttgaaagtggtttatccatatgacaccacaccattcgttaaaatctccattaacgaagtg
gttaaaacattggtagaagccatcattctggtgttcttggttatgtatctgttcttgcaa
aacttccgtgcaacgttgattccaacgattgcagtaccggttgtattgctcgggacattc
gccattctctccgctttgggctattcgataaacaccctaacgatgtttgggatggtgttg
gcgatagggctattggtggatgacgccatcgtcgtcgtcgagaacgtcgaacgtgtgatg
caagaggaagggctgccgccgaaagaagccaccaaaaaatccatggagcaaatccaaggt
gctttggtggggattgcgatggtgctgtctgcggtatttatcccaatggccttcttcggt
ggtgctactggggctatttatcgtcagttctccattactatcgtatcggcgatggtgctc
tcggtactggtggcattgattctgacaccagcattgtgcgcaacgatgctgaaacctatc
gcgaaaggcgagcatgggccaaaaaccggcttcttcggttggtttaaccgcatgttcgat
aaaagtactcaccactataccgacagcgttgccaatatcttgcgcagcacggggcgttat
ctggttatctatctggcgattgtgattggtatgggagtgctgttcctgcgcttaccgtcc
tcattcttgccggaagaggatcagggtgtgttcctgaccatggtgcaactgcctgcgggt
gcgacacaagaacgtactcagaaagtgctaaatcaggtaactgactattatctcgacaaa
gaaaaagacgtggttaattcggtatttaccgttaacggcttcggtttcagtggtcaaggt
cagaacaccggtctggcattcgtcagtctgaaaaactgggatgaacgtccgggtgagcaa
aacaaagtgccagccattgttggccgcgcctccgctgctttctcgcaaattaaagacggt
ttagtcttcgcctttaacttgccagctattgtggaactgggtacggcaaccggcttcgac
ttccagttgattgatcagggtaacgttgggcatcagaaattaactgaagcgcgtaaccaa
ctgcttggcatggcggcgcaacattcggatatgctggtgggcatgcgccctaacggactg
gaagatacaccacagttcaaagtggaagttgatcaggaaaaagcacaagcgcttggcgtc
gctatttctgatatcaataccacgctaggttctgcaatgggcggcagctatgtaaatgac
tttatcgaccgtggtcgtgttaaaaaagtttacgtgcaagctgatgcgccattccgcatg
ctaccggatgatattgataagtggtatgtccgtaacagctcaggccagatggtgtcattt
gccaccttctccagcgcaaaatgggaatacggctcaccgcgtctggaacgttataacggc
ttgccatccatggaaattctgggtcaagcagcaccggggaaaagtaccggtgaagccatg
gacttgatgcaagaattggcggctaaattacctagtggcgtgggttatgactggaccggt
atgtcctatcaggaacgtctgtcgggtaaccaggctccagcactgtatgctatctcactg
atagtggtcttcttgtgtctggctgcgttgtatgaaagctggtcgattccattctcggtc
atgttggtggttccactgggtgtggttggtgcgttactggctgcctcactacgcggttta
aacaacgacgtttacttccaagtcggcttgttgaccacgattgggctatcagcgaagaac
gccatcttgattgtcgagttcgctaaggacttgatggacaaagaaggtaaaggcttggtg
gagtcaacattggaggcggtgcgtatgcgtctgcgaccaatcttgatgacctcactggcc
tttatccttggggttctgccactggttatcagtagcggtgcaggttctggtgcacagaat
gcggttggtaccggggtcatgggcggtatgataacggccacagtactggccatcttcttt
gttccggtattcttcgtggtggttcgccgccgcttcagccggaaaagtgaagatgtagaa
catgcacatgctgttgaccataaggtgaagtaa
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