Yersinia entomophaga: PL78_08085 Help Entry PL78_08085        CDS       T09771                                  Symbol ligB Name (GenBank) NAD-dependent DNA ligase LigB   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism yeg  Yersinia entomophaga Pathway yeg03030   DNA replication yeg03410   Base excision repair yeg03420   Nucleotide excision repair yeg03430   Mismatch repair Brite KEGG Orthology (KO) [BR:yeg00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     PL78_08085 (ligB)    03410 Base excision repair     PL78_08085 (ligB)    03420 Nucleotide excision repair     PL78_08085 (ligB)    03430 Mismatch repair     PL78_08085 (ligB)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:yeg03032]     PL78_08085 (ligB)    03400 DNA repair and recombination proteins [BR:yeg03400]     PL78_08085 (ligB) Enzymes [BR:yeg01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      PL78_08085 (ligB) DNA replication proteins [BR:yeg03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      PL78_08085 (ligB) DNA repair and recombination proteins [BR:yeg03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      PL78_08085 (ligB)    NER (nucleotide excision repair)     GGR (global genome repair) factors      PL78_08085 (ligB)    MMR (mismatch excision repair)     DNA ligase      PL78_08085 (ligB)   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       PL78_08085 (ligB) BRITE hierarchy Motif Pfam:  DNA_ligase_aden DNA_ligase_OB HHH_5 HHH RNA_ligase Motif Other DBs NCBI-ProteinID:  ANI29781 UniProt:  A0A3S6EZ79 LinkDB All DBs Position complement(1777695..1779410) Genome browser AA seq 571 aa AA seqDB search MDKLIILGMLLVSIFYGRSSASVDCPSWTLSEFETEISRLEKQLEEWDVAYFQQGNSLIE DDIYDQLRYRLNHWVRCIAIPEKRVNNALSPTISLQNRLSHPVAHTGLKKLHGKGALSEW LAERKNLWVQPKVDGVAVTLTYVQGNLTQAISRGDGAVGQNWTDKVKYIPAIPHFISQAP PLLVLHGELFLKVTHHKQKEAGGINARALVAGAMMKKSPSALLSDIGIFIWAWPDGPAIM TEKLRELRRMGFSLTKEFSMPVTSASDIVAWRQRWFESPLPFVTDGIVIRQEQEPAGHHW QSQPGYWSIAWKYSPFQQVTQVKSVNFTIGRTGKVSAILSLEPIRLDDKWVKNVNVGSVE RWRYWDVIPGDQITVSLAGQGIPRLDNVVWRVENRHVVNPPDSALFHSLSCFRRQPASCN EQFIARLSWLSSRSGLNMAGISTGVWQAFIDHGLMSNLVEWLEFTPDDIAAVPGIGAAKA KTIYQQFQVARERPFGEWLAALGFPKLAKKEDYPERWTDLLRRSNQEWLSLANIGKKRVK QIMAFAADSEVRQLVATLSHHQIKGFEFIER NT seq 1716 nt NT seq  +upstreamnt  +downstreamnt atggataagttaatcatattggggatgctcttggtttctattttctatggcagatcgtca gcttcggtagattgcccgtcatggacgctcagcgaattcgaaacagagatctccagactg gaaaagcaactagaagaatgggatgtcgcttattttcaacagggtaatagcctgattgaa gatgatatttacgatcagcttaggtatcggctcaatcactgggtgcgatgcatagcaata cccgagaaaagagttaataacgctctttctcctaccatcagtttgcagaatagattatct catcccgttgctcatacgggattaaaaaaactccatgggaaaggggctttatctgaatgg ctcgccgaacgaaaaaacctttgggttcagcctaaagttgatggtgtcgcggtcacgtta acctatgttcaaggaaacctgacgcaagcgatcagccgaggcgacggtgcagtaggccag aactggacggataaagtgaaatatatacctgcaattccccactttatttctcaggctccg ccgttactggtcctgcacggcgaacttttcctaaaggtaactcaccataaacagaaagaa gctggcggtattaatgcccgggctttggtggcgggagcaatgatgaaaaagtcaccttcg gcattgttgtccgatataggtattttcatttgggcatggcctgatggacccgcgattatg accgagaagctgcgtgagttacggcggatgggattttcgctgactaaagagttcagtatg ccggtcacttcagcgagtgatattgttgcatggcgacaacgctggtttgaatcaccgttg ccatttgtgaccgacggaattgttatccggcaagagcaagaacctgcggggcatcattgg caatcacagcccggttactggtctattgcctggaaatactctccctttcagcaagtcacg caggtgaaatcagttaatttcaccataggccgaacagggaaggtcagcgctattttatct ctagagcctattcggctggatgacaaatgggtgaaaaatgtcaatgttggatcggttgaa cgctggcggtactgggacgtcattcccggcgatcaaataacagtttcgttagcggggcaa ggtatccctcgcttggataacgttgtctggcgagtggagaatcggcatgtcgttaacccc cccgattccgctttatttcattcgttaagctgttttcgccgtcaacccgcttcttgtaat gagcaatttattgcccgtttgagttggttaagtagccgttcaggactgaatatggcaggt attagtacgggtgtttggcaggcctttatcgaccatggcttgatgagtaatctcgttgaa tggcttgaatttacaccggatgatattgccgctgtaccaggtataggagcggcgaaagca aagacgatttatcaacagtttcaggtagcaagagagcggccgtttggcgagtggttggcg gcgttgggtttccccaagctagctaaaaaagaagactatccagaacgctggacagattta ttacggcgctcgaaccaagaatggctatctttggcgaatataggtaagaagcgtgtaaaa caaataatggcatttgccgctgattcggaggtgcggcaacttgtagctacgttgtcgcac catcaaataaaggggtttgaatttatagagcgctag

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