Yersinia hibernica LC20: LC20_01438
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Entry
LC20_01438 CDS
T03179
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
yel
Yersinia hibernica LC20
Pathway
yel01501
beta-Lactam resistance
yel01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
yel00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LC20_01438
01503 Cationic antimicrobial peptide (CAMP) resistance
LC20_01438
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
yel03036
]
LC20_01438
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
yel02000
]
LC20_01438
01504 Antimicrobial resistance genes [BR:
yel01504
]
LC20_01438
Chromosome and associated proteins [BR:
yel03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
LC20_01438
Transporters [BR:
yel02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
LC20_01438
Antimicrobial resistance genes [BR:
yel01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
LC20_01438
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CusB_dom_1
HlyD_D23
HlyD_3
Biotin_lipoyl_2
OEP
Motif
Other DBs
NCBI-ProteinID:
AHM72692
UniProt:
A0A7U4GDT1
LinkDB
All DBs
Position
complement(1289414..1290601)
Genome browser
AA seq
395 aa
AA seq
DB search
MSKNRGVMPLAAILVLSGSLVLIGCNDKDAAQAHAQQAPEVGIVTLKAAPLNITTELPGR
TSAFRVAEVRPQVSGIILKRNYVEGSDVTAGTSLYQIDPATYQAAYDSAKGDLAKAQAAA
EIARLTVNRYKPLLGTNYISKQEYDQAVSDLMQANAAVLAAKAAVETARINLAYTQVTSP
ISGRTGKSSVTEGALVTSGQATALTTVQQLNPMYVDVTQSSDEFLRLKKELADGTLKQED
GKAKVRLLLENGTEYAETGSLEFSGVTVDETTGSITIRAIFPNPNEALLPGMFVRARLDE
GVRPDALLVPQQGVTRNPRGEATAMVVGADDKVELRTLVANQAIGNKWLVTDGLKAGDRL
IVSGLQKIRPGVQVKVQEVTDTEQKTAPADTAKKS
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaaacagaggggtaatgcctctggctgcaattctggtactttcaggcagctta
gtacttataggatgtaatgacaaagatgcggcgcaagcccatgctcaacaggcacctgaa
gtcggcattgtgacgttgaaagcagcgccactgaatatcacaaccgaattgcctggccgc
acgtccgcattccgtgttgcagaagttcgtccgcaggttagcggtattatccttaaacgt
aattatgttgaaggcagcgacgtcactgccggaacatcactttatcaaattgatcctgcg
acttatcaggccgcttatgacagcgcaaaaggtgatttagctaaggcccaagccgcagct
gaaatcgctcgtctgacggttaatcgctacaaaccattgctgggtaccaactacatcagt
aagcaagagtatgaccaagcggtgtctgatttgatgcaagccaatgctgctgttttagcc
gcaaaagcagcggtagaaactgctcgtattaacttagcttatactcaggtcacctcgcca
atcagtggccgcacaggtaaatcttcagtgactgaaggtgcattggtgaccagtggccag
gcaactgcgctaaccactgttcagcagcttaacccgatgtatgttgatgtcactcagtca
agtgatgagttcctgcgcctgaaaaaagagctggctgatggcacgctcaaacaagaagac
ggtaaagctaaagtgcgcttgttgctggaaaacggcactgagtatgccgaaaccggtagc
ttggaattctctggtgtgacggtggacgaaaccaccggctccatcactatccgcgctatc
ttccctaacccgaatgaagcattgttgccagggatgttcgtccgcgcccgtctggatgaa
ggtgtccgccctgatgcactgttagtgcctcaacaaggtgtgacgcgcaatcctcgtggc
gaagccaccgcgatggtcgtcggagcggatgacaaagttgagctgcgtacactggtcgca
aatcaagctattggcaataaatggttggtgactgacggcttgaaagcaggcgatcgtctg
attgtttccggtttacagaaaatcagaccgggcgtgcaggtgaaagtgcaagaagttact
gatacagaacaaaaaacagccccggctgacacagcgaagaagtcttaa
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