Yersinia enterocolitica WA: CH47_944
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Entry
CH47_944 CDS
T03643
Symbol
rumA
Name
(GenBank) 23S rRNA (uracil-5-)-methyltransferase RumA
KO
K03212
23S rRNA (uracil747-C5)-methyltransferase [EC:
2.1.1.189
]
Organism
yew
Yersinia enterocolitica WA
Brite
KEGG Orthology (KO) [BR:
yew00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
yew03009
]
CH47_944 (rumA)
Enzymes [BR:
yew01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.189 23S rRNA (uracil747-C5)-methyltransferase
CH47_944 (rumA)
Ribosome biogenesis [BR:
yew03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CH47_944 (rumA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
MTS
Methyltransf_25
Methyltransf_15
Methyltransf_12
Cons_hypoth95
Methyltransf_11
Methyltransf_32
Methyltransf_4
Motif
Other DBs
NCBI-ProteinID:
AJI83778
LinkDB
All DBs
Position
993544..994671
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AA seq
375 aa
AA seq
DB search
MQCAQYTAGRCRSCQWLDKPYPQQLADKQNHLENLLSDHRVTQWLSPVFGQESAFRNKAK
MVVSGSVERPLLGMLHRDGTPVDLCECPLYPTSFAPVFAVLKTFIARAGLTPYNVARKRG
ELKFLLLTESTYSGELMLRFVLRSQTKLSQLQAALPWLQQQLPQLAVISVNIQPVHMAIL
EGEQEMPLTEQQALPEIFNQVPLFIRPQSFFQTNPQVAASLYATARQWVRELKIDSMWDL
FCGVGGFGLHCADTETRLTGIEISAEAIACARQSADQLGLKNVTFAALDSTQFATAETQV
PQLVLVNPPRRGIGAQLCEYLSQMAPQFILYSSCNAETMAKDISLLADYRIERVQLFDMF
PHTAHYEVLSLLIKR
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgcaatgcgcacaatatacggcgggtcgctgccgttcctgtcagtggctggataaacct
tatccgcagcaacttgctgataaacaaaatcatttagaaaatctgctatctgatcaccgc
gtcactcaatggctgtcgccggtcttcgggcaggaaagtgcttttcgtaataaagccaaa
atggtggtcagtggtagcgttgagcgcccattattagggatgttacaccgcgatggcacc
ccggttgatttatgcgaatgcccactttatccaaccagctttgcaccggtatttgcagta
ctaaaaacttttattgcccgtgcagggctgacgccttataacgttgcccgcaagcgcggt
gaactgaagttcctgttattgacagaaagcacttatagcggcgagctaatgttgcgcttt
gtactgcgctcacaaaccaagctgtcgcagttgcaagcggctttaccctggttacagcaa
caattaccccaactggcggttatctcggtgaatattcagccagtacatatggcgattttg
gaaggggagcaggagatgccattaaccgaacagcaggcgctaccagaaatctttaatcag
gtgccgttgtttatccgcccacaaagttttttccagacaaatccacaggttgcggcatca
ctttatgccacagcacgccaatgggtgcgcgaactgaagattgatagcatgtgggatctg
ttttgtggggtggggggctttggtctacattgtgcggatactgaaactcggttgaccgga
attgaaatcagtgccgaagctatcgcctgcgcacgccagtcggcagaccaattgggactg
aaaaatgtcacttttgccgccctggattcaacccaattcgccaccgcagaaacacaagtg
ccgcaattggtcttggttaacccaccacggcgcggcattggtgcgcagctgtgtgaatat
ctcagccaaatggcaccgcaattcattctctattcaagctgtaatgccgagacaatggca
aaagatatcagtttgttagcggactatcgcattgagcgggtgcagttgtttgatatgttt
ccgcataccgcacattatgaagttttatccttacttattaagcgctaa
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