Yersinia hibernica CFS1934: D5F51_19005
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Entry
D5F51_19005 CDS
T05961
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
yhi
Yersinia hibernica CFS1934
Pathway
yhi01501
beta-Lactam resistance
yhi01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
yhi00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
D5F51_19005
01503 Cationic antimicrobial peptide (CAMP) resistance
D5F51_19005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
yhi03036
]
D5F51_19005
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
yhi02000
]
D5F51_19005
01504 Antimicrobial resistance genes [BR:
yhi01504
]
D5F51_19005
Chromosome and associated proteins [BR:
yhi03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
D5F51_19005
Transporters [BR:
yhi02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
D5F51_19005
Antimicrobial resistance genes [BR:
yhi01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
D5F51_19005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSH_RND
RND-MFP_C
Beta-barrel_RND
YknX_C
HH_MFP_RND
CzcB_C
Beta-barrel_RND_2
HH_YBHG
HH_EMRA
BSH_CzcB
BSH_YhbJ
RapA_C
Motif
Other DBs
NCBI-ProteinID:
QAX80431
UniProt:
A0ABX5R4Z5
LinkDB
All DBs
Position
complement(4010552..4011754)
Genome browser
AA seq
400 aa
AA seq
DB search
MLTLNLVRNPRAFNMQHALCARLYHQLAYIVVLMLGISSYSAMAAAPLPAVTVAVVTSVT
PDSALQFLGRVEAIQAVDVTTRTEGFIAARLFTEGQMVKQGDLLYEIDPALHQASVTQAQ
AQLDSATASANHAQVTLTRLQRLGNNRSVSQAEVDEAQAQRDISRAAVAQAQANLQIQQL
QLSFTRIYAPITGQIGHSRFNVGSLINPASGTLVSIVQLSPIRVAIAVNERDYITATYQL
SAAGAALSNENSALAFEHFTPRIQLANGKQYPESGVFESVDNQIDKQTGTVTIRTRFDNP
RHLLLPGGVVNVSLAAETVTAVAAIPIAALQQNKQGHFVLVVTDKDQVEVRPVTLGEQFE
QQYEVKDGLKMGERVIVSGLQHVRPGMTVSASVATPLTAN
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgttgacattgaatttggttcgcaacccgcgagcatttaacatgcagcacgccctatgt
gctcggctatatcatcaactcgcatatatcgtggtgttaatgctggggattagctcatat
agcgccatggctgcggcacctttgcctgcagtgactgtcgcggttgtgacctctgtgacg
ccagatagtgcattgcagtttctcgggcgggtagaagctattcaggcggtggatgtcacc
acccgaactgaggggtttattgcggccagattatttactgaagggcagatggtcaaacag
ggggatttattgtatgaaattgatcccgctttgcatcaggcttccgtcactcaggcgcaa
gcacaattagacagcgcaaccgccagcgccaaccatgcgcaggtgacgctcacccgtttg
cagcgtttgggcaataaccgctcagttagtcaggctgaagttgatgaagcccaggcgcag
cgggatatcagccgggcggcagtagcccaggcgcaagcaaatctgcaaattcagcagctg
caactcagtttcacccgcatctatgccccgattacaggccaaattggtcacagccgcttt
aatgtcggcagtttgattaacccggccagtggcacattggtgagtattgtgcagctcagt
cctatccgggtggcaattgctgttaatgaaagagattacatcacggccacctatcagttg
tcagcggcaggcgctgctttaagcaatgaaaacagtgccttggcgtttgagcatttcact
ccgcgtattcagttggcaaatggtaaacagtatccagaaagtggtgtttttgaatctgtt
gataatcaaattgataaacagaccggtactgtgactatccgcacccgttttgataacccg
cgacatctattattacccggtggcgtcgtcaatgtgtcactggccgcagaaacagtaaca
gccgtcgccgctatcccgattgccgcattgcagcagaataagcagggccattttgttttg
gtggtcacagataaggatcaggtggaagtgcgccccgtgactcttggcgagcagttcgaa
caacaatatgaagtgaaagatgggctaaaaatgggcgagcgcgtcattgtgtcggggctg
caacatgttcggcctggtatgacggtgagcgccagtgttgctacgccgctaactgcgaac
taa
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