Yersinia kristensenii: HRD70_01165
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Entry
HRD70_01165 CDS
T08672
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
yki
Yersinia kristensenii
Pathway
yki01501
beta-Lactam resistance
yki01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
yki00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HRD70_01165
01503 Cationic antimicrobial peptide (CAMP) resistance
HRD70_01165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
yki03036
]
HRD70_01165
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
yki02000
]
HRD70_01165
01504 Antimicrobial resistance genes [BR:
yki01504
]
HRD70_01165
Chromosome and associated proteins [BR:
yki03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
HRD70_01165
Transporters [BR:
yki02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
HRD70_01165
Antimicrobial resistance genes [BR:
yki01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
HRD70_01165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RND-MFP_C
BSH_RND
Beta-barrel_RND
YknX_C
HH_MFP_RND
CzcB_C
Beta-barrel_RND_2
HH_YBHG
HH_EMRA
BSH_YhbJ
BSH_CzcB
DPBB_CI111
RapA_C
Motif
Other DBs
NCBI-ProteinID:
QKJ13926
LinkDB
All DBs
Position
complement(284402..285604)
Genome browser
AA seq
400 aa
AA seq
DB search
MSTLNLVRNAIMLNAQRILCARLSSLPAYAFVLMLGISTHSTVAATPLPAVTVAVVASAT
PDTALQFLGRVEAIQAVDVTTRTEGFIAARLFTEGQMVKQGDLLYEIDPVLHQASVTQAQ
AQLDSATASANHAQVTLTRLQRLGNNRSVSQAEVDEAQAQRDISRAAVAQAQANLQIQQL
QLGFTRIYAPITGQIGHSRFNVGSLINPASGTLVSIVQLDPIRVAIAINERDYITATYQL
SAASGGSASENSALAFEHFTPRIQLANGKQYPEGGVFESVDNQIDKQTGTVTIRTRFDNP
RHLLLPGGVVNVSLAAETAKAVAAIPIAALQQNKQGHFVLVVTDKDQVEVRPVTLGEQFE
QQYEVKEGLKVGERVIVSGLQHVRPGMTVSASVAPPLTAN
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgtctacactgaatttggttcgcaacgcgataatgcttaacgcgcagcgaatcctatgt
gctcggctatcttctctacccgcatatgcttttgtgttaatgctgggtatcagcacacat
agcactgtggcagcaacacctttacctgcggtgactgtcgcggtagtggcctctgctacc
ccagatactgcgttgcagtttctcggccgggtggaagcaattcaggcggtggatgtcaca
acccgtactgaggggtttattgccgccagattgtttactgaagggcagatggtcaagcag
ggggatttgctgtatgaaattgatccggtcttacatcaagcatccgtcacccaagcacag
gctcaattagatagcgccaccgccagcgccaaccatgcgcaagtgactctcacccgtttg
cagcgtttgggtaataaccgctcggtaagtcaggcggaagtcgatgaagcacaggcgcag
cgggatatcagccgggcggcagtggctcaggcgcaagcaaacctacaaattcagcaattg
caactcggctttactcgcatttatgccccgatcaccggccaaattggtcacagccgcttt
aacgtcggcagtttgattaacccggccagtggtacgttggtcagtattgtgcagctcgac
cctattcgtgtcgctattgctattaatgaaagggattacatcactgccacctatcaatta
tctgcagcaagtggcggatcggcgagtgaaaacagcgcgctggcatttgagcattttact
ccgcgcattcaactggcgaatggcaagcaatatccggaaggcggcgtctttgaatctgtt
gataatcaaattgataaacagaccggcaccgtgactattcgaactcgttttgacaaccca
cgacatttattgctgcccggcggggtggtgaatgtgtcgttggccgcagaaacagcaaaa
gccgtcgcggctattccgattgccgcattgcaacagaataagcagggccattttgtgttg
gtggtaacagataaagatcaggtggaagtgcggcccgtcactctaggcgagcagtttgaa
cagcaatatgaagtgaaagagggactgaaagtgggcgagcgggtcattgtgtcggggcta
cagcatgtccggcctggcatgacagtgagcgccagtgttgcaccgccgctgactgcgaac
taa
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integrated database retrieval system
