Yersinia rochesterensis: CH54_471
Help
Entry
CH54_471 CDS
T03609
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
ykr
Yersinia rochesterensis
Pathway
ykr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ykr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CH54_471 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ykr03400
]
CH54_471 (nth)
Enzymes [BR:
ykr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CH54_471 (nth)
DNA repair and recombination proteins [BR:
ykr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CH54_471 (nth)
Prokaryotic type
CH54_471 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AJJ34723
LinkDB
All DBs
Position
505704..506345
Genome browser
AA seq
213 aa
AA seq
DB search
MNKEKRVAILTRLRDNDPHPTTELVYSTPFELLISVLLSAQATDVSVNKATAKLYPVANT
PQAMLDLGVDGLKSYIKTIGLFNTKAENVIKTCRILLEKHQGEVPEDRAALEALPGVGRK
TANVVLNTAFGWPTIAVDTHIFRVCNRTGFAPGSNVDQVETKLLKVVPAEFKLDCHHWLI
LHGRYTCVARKPRCGSCIIEDLCEFKEKVYPEH
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagaaaaacgcgtcgctattttgactcgcctgcgggataacgacccacacccc
acgaccgagttagtctatagcacgccctttgagttattgatttcggtacttttatcggcg
caagcaactgatgtcagtgtcaataaagccactgccaagctctatccggtagctaacact
ccacaggctatgctggatctgggtgttgatggcctcaaatcatatattaaaactattggt
ctatttaataccaaagccgaaaatgtgattaaaacctgtcggatattgctggaaaaacat
caaggcgaagtgccagaggatcgcgctgcacttgaagcgttgccaggtgtgggccgcaaa
acagccaatgtggtgctgaataccgcctttggctggcctaccattgcggttgatacccat
atattccgcgtatgtaaccgtaccggttttgcccccggtagtaatgtggatcaggttgaa
accaagttactcaaagtggttccggctgaatttaaactggactgtcaccactggcttatt
ctgcatggtcgctacacctgtgttgctcgtaagccgcgctgtggctcatgcattattgaa
gacttatgcgagtttaaagagaaagtctatcctgaacattaa
DBGET
integrated database retrieval system
