Yarrowia lipolytica: 2910197
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Entry
2910197 CDS
T01033
Symbol
YALI2_D00439g
Name
(RefSeq) ABC transporter domain-containing protein
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
yli
Yarrowia lipolytica
Pathway
yli03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
yli00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
2910197 (YALI2_D00439g)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
yli03019
]
2910197 (YALI2_D00439g)
Messenger RNA biogenesis [BR:
yli03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
2910197 (YALI2_D00439g)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
AAA_29
AAA_23
AAA_15
FtsK_SpoIIIE
AAA_25
SRP54
AAA_28
RsgA_GTPase
AAA
Zeta_toxin
ORC-CDC6-like
MMR_HSR1
AAA_22
AAA_16
NACHT
nSTAND3
Motif
Other DBs
NCBI-GeneID:
2910197
NCBI-ProteinID:
XP_503089
UniProt:
A0A1H6PUW0
Q6C8C3
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All DBs
Position
D:2704969..2705730
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AA seq
253 aa
AA seq
DB search
MSITAQNLSYTFPNGLVGIHPTSFDLPPGSRTLLIGANGAGKSTLLRILAGKTLAKADSL
IVQGFDPFRDCSPPGIRYLGTEWAGNPIVRHDIEVTQLLKYAGGDAYPDRRDHLVQLLDV
DPTWHMHEVSDGERRRVQLVMGLLVPWETLLLDEVTVDLDVLARTNLLNFLKEETETRQA
TIVYATHIFDGLNQWPTHVAHMSQSTMLSCDTYDVVQREFPGKSILEIALGWITGDMERR
GPRLPRAKRQRVN
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatcacggcgcaaaacctctcctacaccttccccaatgggcttgtgggcatccat
cccacctcgttcgacctgcctcccgggtctagaacgttgctgatcggagccaatggagct
ggaaagtcgacgttgctgcgaattctggcgggaaagaccctcgccaaggccgacagtctc
attgtccagggctttgatcccttccgagactgttctcctcctggaatccggtacctgggc
accgaatgggccggcaatccaatcgtgagacacgacattgaggtcacccagctgctaaag
tacgccggaggagatgcctatcctgaccgacgagaccatcttgtgcagctgctggacgtg
gatcccacctggcacatgcacgaggtgtctgacggagagcgtcggcgagtgcagctagtc
atgggactgctggtgccgtgggaaactcttctgctggacgaggtgacggttgatctggac
gttctggcccgaactaacctgctcaacttcctcaaggaggagaccgagacccgacaagcc
accattgtttacgccacccatattttcgacggcctcaaccagtggcctacgcacgttgcc
catatgagccagtccaccatgttgagttgcgacacctacgatgtggtccagcgggagttc
cctggcaagagcattctggaaattgcactgggctggatcaccggggatatggaacggcgt
gggcctcgcctccccagagcaaagagacagagggttaactag
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