Yersinia massiliensis: DA391_14615
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Entry
DA391_14615 CDS
T05402
Name
(GenBank) 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC
KO
K03212
23S rRNA (uracil747-C5)-methyltransferase [EC:
2.1.1.189
]
Organism
yma
Yersinia massiliensis
Brite
KEGG Orthology (KO) [BR:
yma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
yma03009
]
DA391_14615
Enzymes [BR:
yma01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.189 23S rRNA (uracil747-C5)-methyltransferase
DA391_14615
Ribosome biogenesis [BR:
yma03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
DA391_14615
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
MTS
Methyltransf_25
Methyltransf_15
Cons_hypoth95
Methyltransf_12
Methyltransf_4
Motif
Other DBs
NCBI-ProteinID:
AVX40462
UniProt:
A0A2R4NWF8
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Position
complement(3127100..3128230)
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AA seq
376 aa
AA seq
DB search
MHCAQYAAGRCRSCQWLDKPYPQQLADKQHHLENLLSGHSVAQWLTPVFGQESAFRNKAK
MVVSGSVERPLLGMLHRDGTPVDLCDCPLYPASFAPVFALLKTFIARAGLTPYNVARKRG
ELKFLLLTESTHSGELMLRFVLRSETKLAQLQAALPWLQQQLPQLAVISANIQPVHMAIL
EGEKEIPLTEQQALPEQFNQVPLFIRPQSFFQTNPQVAASLYATARQWVRELNIDSMWDL
FCGVGGFGLHCAGPQTKLTGIEISAEAIACARQSADLLGLKNVSFAALDSTRFATAEAQV
PQLVLVNPPRRGIGTELCDYLAQMAPEYILYSSCNAETMAKDISRLAAYRIERVQLFDMF
AHTAHYEALALLTLRP
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgcattgcgctcagtatgcggcaggtcgctgtcgttcctgtcagtggttggataagcct
tatccacaacaactggctgacaaacaacatcatttagaaaatttgctctctgggcattca
gtggcacagtggttaacgccagttttcgggcaggaaagcgcttttcgaaataaagcaaaa
atggtggtcagtggcagtgtcgagcgtccgttattagggatgttacatcgtgacggcacg
cctgtggatttatgtgactgtccgctttatccggccagttttgcgcccgtttttgccctc
cttaaaacctttattgcccgtgcaggtttaacgccatacaacgttgcccgtaagcgtggt
gagcttaaattcctgttactgactgaaagtacgcatagtggtgagttgatgctgcgtttt
gttttgcgttcggaaactaaattggcgcaattacaggcggcgttaccctggttacaacag
cagttgcctcaattggcggttatctcggccaatattcagccggtgcatatggcgattttg
gaaggggagaaagagatccctttgactgagcagcaggcattgccggagcagtttaatcag
gtgccactgtttatccgcccgcaaagctttttccagacaaatccgcaggttgcagcttca
ctctatgccactgctcgccagtgggtgcgtgagttaaatatcgatagtatgtgggatcta
ttctgtggcgttggcggttttggtttgcactgcgcggggccgcagacaaaactcacagga
attgaaattagcgctgaagccattgcctgcgcgcgtcagtcagcagatctgttagggtta
aaaaacgtaagttttgctgcgcttgattccactcgcttcgctaccgcagaagcgcaagtg
ccgcaattggtattggtgaacccgccacggcgcggaattggaacagagctgtgtgattat
ctggctcagatggcacctgaatatattctctattcaagctgtaacgcagagacaatggcg
aaggatattagcaggttagcggcatatcgtattgagcgggtgcagttgtttgatatgttt
gcgcatacggcacattatgaagctttagccctgcttacccttcgtccttga
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