Yersinia massiliensis: DA391_18625
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Entry
DA391_18625 CDS
T05402
Symbol
lpxC
Name
(GenBank) UDP-3-O-acyl-N-acetylglucosamine deacetylase
KO
K02535
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:
3.5.1.108
]
Organism
yma
Yersinia massiliensis
Pathway
yma00540
Lipopolysaccharide biosynthesis
yma01100
Metabolic pathways
Module
yma_M00060
KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type
Brite
KEGG Orthology (KO) [BR:
yma00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
DA391_18625 (lpxC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
yma01005
]
DA391_18625 (lpxC)
Enzymes [BR:
yma01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
DA391_18625 (lpxC)
Lipopolysaccharide biosynthesis proteins [BR:
yma01005
]
Lipid A
DA391_18625 (lpxC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LpxC
DUF6225
Motif
Other DBs
NCBI-ProteinID:
AVX39501
UniProt:
A0A0T9NRG1
LinkDB
All DBs
Position
complement(4008750..4009670)
Genome browser
AA seq
306 aa
AA seq
DB search
MIKQRTLKRIVQATGVGLHTGKKVTLTMRPAPANTGVIYRRTDLNPPVDFPADAKSVRDT
MLCTCLVNEHDVRISTVEHLNAALAGLGIDNIIIEVNAPEVPIMDGSASPFVYLLLDAGI
EELNSAKKFLRLKETVRVEDGDKWAELSPFNGFRLDFTIDFNHPAIDSSTQRYRLDFSAD
SFVRQISRARTFGFMRDIEYLQSRGLCLGGSFDCAIVVDDYRVLNEDGLRFEDEFVRHKM
LDAIGDLFMCGHNIIGAFTAYKSGHALNNKLLQAVLAKQEAWEFVTFQDEAEMPLAFKAP
STVLAY
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaacaaaggactttaaaacgtattgttcaggcgactggcgtcggtttgcacacc
ggtaaaaaagtcacgctgacaatgcgacccgcgccggctaataccggggtcatctatcgt
cgcactgacttgaatccaccggttgattttccggcagatgcaaaatccgtgcgtgatacc
atgctctgtacttgcttagtcaatgagcatgacgtgcgtatttctactgttgaacatctc
aacgctgctttggcagggttagggatcgataacattattattgaagttaacgcaccagaa
gtgccgattatggacggtagtgccagtccattcgtgtatttactgctagatgcgggtatc
gaagagttaaactctgcgaagaaattcctgcgtctgaaagagaccgtgcgggtagaagac
ggtgataaatgggctgaattgtctccatttaatggattccgtttagatttcaccattgat
tttaatcacccagcgattgactcaagtactcagcgttaccgcttagatttctcggccgat
tcattcgtccgccaaatcagccgtgcgcgtacttttggtttcatgcgtgatatcgaatat
ctgcagtcccgcggtttgtgcctgggcggcagcttcgattgtgccatcgtggttgatgat
taccgcgtattaaatgaagatggcctgcgcttcgaagatgagtttgttcgtcataaaatg
ctggacgccattggcgacctgtttatgtgtggtcataacattattggcgcatttactgcg
tacaaatctggccatgcgttaaacaacaagttattgcaggctgttttagctaagcaagaa
gcttgggaatttgtgacgttccaagacgaagctgaaatgccgttggcatttaaagcaccg
tctacggtattagcctactaa
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