KEGG   Yersinia pestis Antiqua (biovar Antiqua): YPA_0021
Entry
YPA_0021          CDS       T00369                                 
Name
(GenBank) methionine synthase (B12-dependent)
  KO
K00548  5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
Organism
ypa  Yersinia pestis Antiqua (biovar Antiqua)
Pathway
ypa00270  Cysteine and methionine metabolism
ypa00450  Selenocompound metabolism
ypa00670  One carbon pool by folate
ypa01100  Metabolic pathways
ypa01110  Biosynthesis of secondary metabolites
ypa01230  Biosynthesis of amino acids
ypa04981  Folate transport and metabolism
Module
ypa_M00017  Methionine biosynthesis, aspartate => homoserine => methionine
Brite
KEGG Orthology (KO) [BR:ypa00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00270 Cysteine and methionine metabolism
    YPA_0021
  09106 Metabolism of other amino acids
   00450 Selenocompound metabolism
    YPA_0021
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    YPA_0021
 09150 Organismal Systems
  09154 Digestive system
   04981 Folate transport and metabolism
    YPA_0021
   04980 Cobalamin transport and metabolism
    YPA_0021
Enzymes [BR:ypa01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.13  methionine synthase
     YPA_0021
SSDB
Motif
Pfam: Met_synt_B12 S-methyl_trans Pterin_bind B12-binding_2 B12-binding
Other DBs
NCBI-ProteinID: ABG11990
UniProt: A0A0E1NU22
LinkDB
Position
27815..31510
AA seq 1231 aa
MVDTVIDNKVKELHQQLAQRILVLDGGMGTMIQSYRLEEADYRGARFADWASDLKGNNDL
LVLSKPEVITAIHNAYLEAGADILETNTFNSTSIAMADYQMASLSAEINYEAARLARICA
DEWSARTPEKPRYVAGVLGPTNRTASISPKVNDPAFRNVSFDQLVEAYRESTRALIEGGV
DLIMIETVFDTLNAKAATFAVESEFEVMGVLLPVMISGTITDASGRTLSGQTTEAFYNSL
RHVKPLSFGLNCALGPDELRQYVAELSRISEYYVSAHPNAGLPNAFGEYDLEAKEMAEQI
GEWARAGFLNIVGGCCGTTPRHIAAMVNAVAGVPPRPLPDIPVACRLAGLEPLTIDANTL
FVNVGERTNVTGSARFKRLIKEEKYGEALDVARQQVESGAQIIDINMDEGMLDAEAAMVR
FLNLIAGEPDIARVPIMIDSSRWDVIEKGLKCIQGKGIVNSISMKEGVDAFIHHAKLVRR
YGAAMVVMAFDETGQADTRARKIEICRRAYKILTETVGFPPEDIIFDPNIFAVATGIEEH
NNYAVDFIEACADIKAELPHALISGGVSNVSFSFRGNDPVREAIHAVFLYYAIRNGMDMG
IVNAGQLAIYDDLSDELRDAVEDVILNRRDDSTERLLDLAEKYRDSKSGEVAIQQAEWRG
WPVVKRLEYSLVKGITEFIELDTEEARQQADRPIEVIEGPLMSGMNVVGDLFGEGKMFLP
QVVKSARVMKQAVAYLEPYIEASKQKGTTAGKILLATVKGDVHDIGKNIVGVVLQCNNYE
IIDLGVMVPTEKILRTAREEKVDIIGLSGLITPSLDEMVNVAKEMERQGFTLPLLIGGAT
TSKAHTAVKIEQNYSGSTTYVSNASRSVGVVSALLSDTQREAFVAKTRKEYETVRIQHAR
KKPRTPPVSLQAARNNPTVIDWENYTPPVAHKLGVQVVEASIETLRNYIDWTPFFMTWSL
AGKYPRILEDEVVGEEAKRLLADANALLDKLSAEDLLHPKGVVGLFPANSVGDDIEIYRD
ERRDEVLAISYHLRQQTEKTDFPNYCLADYVAPKSSGKADYFGAFAVTGGLEEDALADAY
DAQHDDYNKIMIKALSDRLAEAFAEYLHERVRKVYWGFAPNENLSNEELVRENYQGIRPA
PGYPACPEHTEKGQIWQLLDVETHTGMKLTESYAMWPGASVSGWYFSHPDSKYFAVAQIQ
RDQVEDYAARKGMPTAEVERWLAPNLGYDAD
NT seq 3696 nt   +upstreamnt  +downstreamnt
gtggtggatacagtaatcgataataaggtcaaggaattgcaccagcagttggcgcaacgc
attttggtactggatggtggtatgggcaccatgatccagagctaccgattagaagaagca
gattaccgaggcgcgcgttttgctgactgggcaagtgacctaaaaggtaacaatgacctc
ttggtgctctccaagccagaagtcatcacggcgatccataatgcctaccttgaagccggt
gctgacattctcgaaaccaatacctttaactctacctccattgcgatggcggactatcag
atggcgtcactgtcggctgaaattaactatgaagccgcccgtctggcccgtatctgtgcc
gatgaatggagcgcccgcacgccagaaaaaccacgttatgttgccggggtgctggggcca
accaaccgtactgcctccatctcccctaaagttaatgacccggcgttccgtaacgtcagt
tttgatcagttggtcgaggcctatcgtgagtctacccgcgcgctgattgaagggggtgtt
gatttaattatgatcgaaacggtcttcgatacgttgaatgcgaaggccgcgacctttgcg
gttgaaagcgaattcgaagtgatgggcgtgctgttgccggtgatgatttccggcaccatt
accgatgcctccggccgtacgctgtctggtcaaacgacggaagctttttataactcgctg
cgccatgtcaaaccgctgtcgtttggtctgaactgtgcgctggggccggatgaactgcgc
caatatgttgctgagttatcgcgtatctctgaatattatgtcagtgcgcacccgaatgcc
ggtttgccgaatgcttttggtgaatatgatctggaagccaaagagatggctgagcagatt
ggcgagtgggcacgtgccggatttttgaatattgtcggcggttgctgcggtaccacaccc
cggcatattgcggcgatggtcaacgctgtcgctggggtgcctccgcgcccgttgcctgat
attccggttgcctgccgtttggccgggctggagccactgactatcgatgccaataccctg
tttgtgaacgtcggtgagcggaccaacgtcacgggttcggcacgctttaaacggctgata
aaagaagagaagtacggagaggcgctggatgttgcccgccaacaggtcgaaagcggcgcg
cagatcatcgatatcaacatggacgaaggcatgttggatgccgaagcggccatggtgcgt
ttccttaatctgattgccggggagcctgatattgccagggtgccgattatgatcgactcc
tcaaggtgggatgtgattgaaaaaggcctgaaatgtattcaaggcaaaggcatcgtgaac
tccatttcgatgaaagagggcgttgatgcctttattcatcacgccaaactggtacgccgt
tatggtgccgccatggtggtcatggcctttgatgaaaccgggcaagccgatacccgcgca
cgcaaaatcgagatttgccgccgtgcgtataaaatattgacggaaaccgtcggtttccca
ccagaagatattatcttcgatccgaatatttttgccgtagcgacggggattgaagagcat
aacaattatgccgtcgattttattgaagcctgtgccgatatcaaagccgagttgcctcac
gcgctgatttctggcggtgtctccaacgtttccttctctttccgagggaatgatccagta
cgtgaagccattcatgcagtgttcctctattacgctattcgcaatggcatggatatgggg
attgttaacgccggtcaattggcgatttatgacgacctgtctgatgaattacgtgatgcg
gtcgaggatgtgatcctcaaccgccgtgatgacagtactgagcgcctgctggatttagca
gaaaaataccgtgacagtaaaagtggcgaggtcgcgatccagcaagcagaatggcgtggt
tggccggtggtgaaacggttagagtattcgctggtaaaaggcattactgaatttattgag
ctggataccgaagaagcgcgccagcaggcagatcggccaattgaagtgattgaagggccg
ttaatgtctgggatgaatgtggttggtgacttgtttggtgaaggaaaaatgttcctgcca
caggttgtaaaatcagccagggtaatgaaacaggcggtggcctatctcgaaccttatatt
gaagccagtaagcagaagggtaccaccgccggtaaaatcttattagcaaccgtcaaaggc
gatgtgcatgacatcggcaagaacatcgtgggtgtggttttgcagtgtaataactatgaa
atcatcgatctgggcgtgatggtgccgacggaaaaaattctgcgcactgcacgggaagag
aaggtggatattatcggcctgtctggtctgattaccccgtcgctggacgagatggttaac
gtggcgaaagagatggagcgccaaggctttacgctgccgttgctcattggtggcgcaacg
acatccaaagctcacaccgcggtcaagattgaacaaaattatagcggttccaccacgtat
gtctctaacgcctcgcgcagtgtgggcgtggtatccgcgttgctatcggatacgcaacgg
gaggcatttgtggcaaaaacccgcaaagaatatgagactgtacgtatccaacacgcccgt
aaaaaaccgcgcaccccgccggtcagtttgcaggctgcacggaataacccaacggtgatt
gattgggagaactacactccgccagtggcccataaattgggggtacaggtggtggaggcc
agtattgaaactctgcgcaactatatcgactggacgccattctttatgacctggtcgttg
gcaggcaagtatccgcgcattttagaagatgaggtggtgggggaggaggccaagcgcctg
ctcgccgacgccaatgctttgttggataaattgtccgccgaggatctgctgcatccaaaa
ggcgtggttggtctgttcccggctaacagcgtcggcgatgatatcgaaatttaccgtgat
gagcggcgagatgaggtactggccatcagctatcatttacgccaacagaccgaaaaaacc
gacttcccgaactactgtttagctgactatgtcgcgcctaaatccagtggtaaagccgat
tattttggtgcgtttgcggtgaccggtggcttggaagaagacgcattggccgatgcttat
gatgcgcaacatgatgactacaataaaatcatgattaaggcattatcagaccgtctggcc
gaagcctttgccgagtatctgcatgagcgagtacgtaaagtgtattggggttttgcaccg
aacgaaaatctgagcaacgaagagttggtgcgcgaaaattatcaggggatccgcccggca
ccgggctatcccgcttgcccggagcacaccgagaaaggccaaatttggcagttgttggat
gtcgaaacccacaccggtatgaaactgaccgaatcctacgccatgtggcctggggcttcg
gtatcgggttggtatttcagccacccagacagcaaatattttgccgtagcacaaattcag
cgtgatcaggttgaggattatgccgcccgtaaagggatgcccactgccgaagttgaacgc
tggctagcccctaatctgggttacgatgcggattga

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