Yersinia pestis Harbin 35 (biovar Medievalis): YPC_0996
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Entry
YPC_0996 CDS
T01874
Name
(GenBank) hypothetical protein
KO
K08961
chondroitin-sulfate-ABC endolyase/exolyase [EC:
4.2.2.20
4.2.2.21
]
Organism
yph
Yersinia pestis Harbin 35 (biovar Medievalis)
Brite
KEGG Orthology (KO) [BR:
yph00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
YPC_0996
Enzymes [BR:
yph01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.20 chondroitin-sulfate-ABC endolyase
YPC_0996
4.2.2.21 chondroitin-sulfate-ABC exolyase
YPC_0996
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lyase_catalyt
Lyase_N
Lyase_8
Lyase_8_C
Motif
Other DBs
NCBI-ProteinID:
ADV97673
LinkDB
All DBs
Position
complement(1001469..1004582)
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AA seq
1037 aa
AA seq
DB search
MYAPSRLKLIALTMTTLLGTAAYTPHLSANNTKSAKTEVSQKALMQSSIIDFDGNQLPDF
VTASSGSTLSLSSTRYIMGQQSLKWEWQAGSTMTIEHPITLVTDKVASKTWGRKATQVLS
FWIYNETPVDDYMIVDLGRGLGPSGAPDAGIKVKMNFSGWRTVGVSLQNDLEGREIEGIG
FDDNAEGESGGRSTIAGGAKSDMDSIRFRAPLKAPAGIFYIDRVMLSIDDARYQWSDDHV
KTRYQIPEINFRLPAKLPAPTAGEIAAADDIRGALIRVFTEGQGGENGLVVVDNREKLRA
HFAALKIQRDADGQLSGRHIITDKQKVLYQPEFMDDIDQQRFSDYVLLGDYTTLMFNISR
AYQRSTSEEVRQELADMYILMTQHLLDQGYMDGSGLVTTHHWGYSSRWWYISAMLMANEL
DKHQLRQPVSDALLWYSREFKANFDMVPGPESSDLDYFNTLSRQHLALLMLESDPAKRVA
LLKRFGEYINVALSQTPPGGYDGLRPDGTAWRHEGNYPGYSFPAFKNAGQLVYMLHGTPF
AVSDEGRAALKKAMLSAWVYSNPATSLGLAGRHPFNSSSVTLFQDAFRWLALTGDPKTGD
KVDKALAAAYLQITETPESESEAIFGVRIAPAELPQGNWTFNGGAFGIHRFSDKMVTLKA
YNSNVWSSEIYYRDNRYGRYQSHGAIQVLPYGNQKEIGFVQDGWDWNRNPGTTTIHLPLA
ELDSPNTHTLMLRGNHPFSGHSSLSGKYGMFAFKFDAPSMPKFDSSFTARKSALETENRL
VLLGSNISNNTEKYATETTLFQHGITDKASDLWVNGERITALPYQRALEEGDWLIDGHGN
GYLLTKGAKGEVRRQHQVSANDKSRDPTEGNFSLAWLDHGAKPQNAQYEYLMVLEATPEG
MQQLATDYRAGKKVYEVLRQDASAHIVRDNVTQTTGYAAFSSVTPDEGVVKNIAQPAIVM
TQMQSHGQLKISGVTPDLNMTRTTKATPLAIAVTLNGQWQATENNPQVSVKLAGETTQLV
FTSYFGMPQEVTLKPMN
NT seq
3114 nt
NT seq
+upstream
nt +downstream
nt
atgtatgcaccatccaggttaaaacttattgctcttaccatgaccacattattaggtact
gcggcttacacacctcacctttcggccaataatacaaaaagtgcgaaaacagaggtaagt
caaaaagcgctgatgcaatcttcgattattgatttcgatggcaatcagctccctgatttt
gtcaccgccagttcaggttcaaccttatcgctgagctccacccgctatattatgggtcaa
cagtcgcttaaatgggaatggcaggcaggcagtaccatgaccattgagcatcctattaca
ctggtcaccgataaggtcgcctctaaaacctggggacgtaaagccacacaggtgctctct
ttttggatctataacgaaactccggtggatgattatatgatcgtcgatctggggcgaggg
ctcggcccgtcaggcgcaccggatgccggtattaaagtcaaaatgaatttcagtggctgg
cgcaccgtgggcgtgtcactgcaaaatgatctggaagggcgagaaatcgaaggcattggt
ttcgatgataatgcagaaggtgaaagcggtggacgtagcacgatcgccggtggtgcgaaa
agcgatatggacagcatccgttttcgggcaccgctaaaagcaccagcgggtatcttctat
attgatcgcgttatgttgtctattgatgatgctcgctatcaatggtcagatgatcacgtc
aaaacccgttatcagatcccggaaattaattttcgcttacccgccaaattacccgcacca
acggccggggaaatagcggcagctgatgacattcgtggtgcattgatccgcgtctttacc
gaaggtcaaggtggtgagaatggcttggttgtggtcgataatcgcgagaaattacgcgcg
cattttgcagcattaaaaattcaacgtgatgccgatgggcaattatcaggtcggcatatt
attacagataaacagaaggtgttatatcaaccagagtttatggatgatattgatcagcag
cgtttcagcgattatgtgctcttgggtgattacaccacattaatgttcaatatcagccga
gcctatcagcgcagcacatccgaagaggtgcgtcaggaactggctgacatgtatatcctg
atgactcaacacctgttggatcaaggttatatggatggtagtgggctggtgacaacccac
cactggggatacagctcacgctggtggtatatctcagccatgttaatggcaaacgaactg
gataagcatcaactacgtcagccagtttccgatgcgctgctgtggtattcccgtgaattt
aaagccaactttgatatggttccggggccggaaagctcggatttggactatttcaacacc
ctatcccgtcaacatctggcgttgctgatgctggaatctgatccggccaaacgcgtggca
ttgcttaagcgttttggtgagtacatcaatgtggcactttcacagaccccaccggggggc
tacgacggcttgcggccagatggtacggcatggcgtcatgaaggcaactatccaggttac
tcattccctgcctttaaaaatgccggccaattagtatacatgctacatggcacaccgttt
gcggtgagtgatgaagggcgagcggccctgaaaaaagccatgttatcggcatgggtctac
agtaacccagcaacctcgttggggctggcgggccgtcatccgtttaactcttcaagtgtg
actctgttccaagacgccttccgctggttggcactcacgggggatccgaaaaccggtgat
aaagtggataaagcgctggcggccgcttatctgcaaattaccgaaacaccagaaagtgag
agtgaagcaatctttggtgtgcgcattgctccagcagagctcccccaaggaaactggaca
tttaacggcggtgcattcgggatccaccgcttcagcgacaagatggtgacgctgaaggcg
tacaacagcaatgtctggtcatcagagatctattatcgtgataaccgttatggccgttat
cagagtcatggtgcaatacaagtactcccgtatggtaaccagaaagagataggttttgta
caagatggctgggactggaatcgcaatccgggcacaactacgatccaccttccattagct
gaactggatagcccgaatacgcataccctgatgttacgtggtaatcatccattcagtggt
cactcatcactaagtggcaaatatggcatgtttgcctttaaatttgatgcgccatctatg
ccgaagtttgacagcagttttaccgcgcgtaagagtgctctcgaaactgaaaatcggtta
gttctcttgggcagtaacatcagtaacaatacggaaaaatatgcgactgaaaccactctg
ttccaacatggcattacagataaagccagtgatctctgggtgaacggcgaacgtattacg
gcattgccttaccagcgcgcactggaggaaggtgattggttaattgatggccatggtaac
ggctatctcctgaccaaaggggcgaaaggtgaagtgcgccgccagcatcaggtttctgcc
aatgataaatcccgtgaccctactgaaggcaatttcagtctggcctggcttgatcacggg
gcgaaaccacagaatgcacaatacgaatatctgatggtgctagaggcaacaccggaaggc
atgcaacaactggccacagattatcgggccggtaagaaagtgtatgaagtgttacgtcaa
gatgcctccgcacatattgtgcgtgataacgtgacgcagacaaccggttacgctgccttt
agttctgtaacaccagatgagggtgtggtgaaaaatattgctcagccagccattgttatg
acgcaaatgcagagtcatggtcagcttaagatcagcggcgttacgccagatctgaatatg
acccgcacaacgaaagcgacgccattagcgattgccgtgacactcaacggccagtggcag
gccacggagaataatccgcaggtgagcgtaaaacttgcgggagagaccacgcaactggtg
tttaccagctactttggtatgccacaagaggtcacgctcaagccgatgaactag
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