Yersinia pestis Harbin 35 (biovar Medievalis): YPC_2850
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Entry
YPC_2850 CDS
T01874
Symbol
rumB
Name
(GenBank) tRNA uracil-5--methyltransferase
KO
K03212
23S rRNA (uracil747-C5)-methyltransferase [EC:
2.1.1.189
]
Organism
yph
Yersinia pestis Harbin 35 (biovar Medievalis)
Brite
KEGG Orthology (KO) [BR:
yph00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
yph03009
]
YPC_2850 (rumB)
Enzymes [BR:
yph01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.189 23S rRNA (uracil747-C5)-methyltransferase
YPC_2850 (rumB)
Ribosome biogenesis [BR:
yph03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
YPC_2850 (rumB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
MTS
Methyltransf_25
Methyltransf_15
Cons_hypoth95
Methyltransf_12
Methyltransf_32
Methyltransf_4
Methyltransf_11
Motif
Other DBs
NCBI-ProteinID:
ADV99382
LinkDB
All DBs
Position
complement(2765732..2766862)
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AA seq
376 aa
AA seq
DB search
MHCAQYTAGRCRSCQWLDKPYPQQLADKQHHLESLLAGHAVTQWLAPVFGRESAFRNKAK
MVVSGSVERPLLGMLHRDGTPVDLCACPLYPPSFEPVFTVLKTFIARAGLTPYNVARKRG
ELKFLLLTESTYNGELMLRFVLRSETKLAQLIAALPWLQQQLPQLAVISANIQPVHMAIL
EGEREIPLTEQQALPERFNQVPLYIRPQSFFQTNPQVAASLYATARQWVQEHEVHSMWDL
FCGVGGFGLHCAGPETQLTGIEINAEAIACARQSAEQLGLKNVSFAALDSTRFATAEAQI
PELVLVNPPRRGIGRELCDYLSQMAPKFILYSSCNAETMAKDISLLAGYHIERVQLFDMF
PHTSHYEVLTLLTLRR
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgcattgcgcacagtatacggcaggtcgctgccgttcttgtcagtggttggataaaccc
tatccacaacaactcgctgataaacagcatcatctggaaagcctgttggctggtcatgcg
gtcacccagtggctagcaccggtttttgggcgcgagagtgcctttcgtaacaaggcgaaa
atggtcgtcagcggcagtgtggaacgcccgttactgggtatgctgcatcgtgacggtaca
ccggttgatttatgcgcatgtccactttatccgcccagcttcgaaccggtatttacggta
ctgaaaacctttattgccagggcgggtttgactccctataacgttgctcgcaagcgtggc
gaacttaaattcctgttactcacggaaagtacctacaacggtgaattgatgctgcgcttt
gtgctgcgttctgaaactaaattagcgcagttaattgctgcgttgccgtggctgcaacaa
cagttgccgcagttggcggtgatctcggctaatattcagccagtgcatatggccattctg
gaaggggagcgggagatcccgctgaccgaacaacaggccctgcctgagcggtttaatcag
gtgccgttgtatatccgcccacaaagttttttccagaccaatccacaggtggcggcttcg
ttgtatgcaacagcacggcagtgggtgcaggagcatgaggttcacagtatgtgggatctg
ttctgtggtgtgggcggctttggtttacattgtgcggggccagagactcaattgaccggc
attgaaatcaatgctgaagctatcgcctgtgcccgccagtcggctgagcagttagggcta
aaaaatgtcagtttcgccgcgctggattctacccgctttgctaccgctgaagcccaaata
cctgaactggtcttggtgaatccaccacggcgggggatcggccgcgagttatgtgattac
ctgagccagatggcacctaaatttattctctattcaagttgtaatgcagagacgatggcg
aaagatatcagtttgcttgcgggttaccacattgaacgggtacagctgtttgatatgttc
ccgcataccagtcactacgaagtgctcaccttgctgactctccgtcgctag
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