Yersinia pestis Harbin 35 (biovar Medievalis): YPC_4042
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Entry
YPC_4042 CDS
T01874
Symbol
leuD
Name
(GenBank) 3-isopropylmalate isomerase subunit
KO
K01704
3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:
4.2.1.33
4.2.1.35
]
Organism
yph
Yersinia pestis Harbin 35 (biovar Medievalis)
Pathway
yph00290
Valine, leucine and isoleucine biosynthesis
yph00660
C5-Branched dibasic acid metabolism
yph01100
Metabolic pathways
yph01110
Biosynthesis of secondary metabolites
yph01210
2-Oxocarboxylic acid metabolism
yph01230
Biosynthesis of amino acids
Module
yph_M00432
Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate
Brite
KEGG Orthology (KO) [BR:
yph00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00660 C5-Branched dibasic acid metabolism
YPC_4042 (leuD)
09105 Amino acid metabolism
00290 Valine, leucine and isoleucine biosynthesis
YPC_4042 (leuD)
Enzymes [BR:
yph01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.33 3-isopropylmalate dehydratase
YPC_4042 (leuD)
4.2.1.35 (R)-2-methylmalate dehydratase
YPC_4042 (leuD)
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Gene cluster
GFIT
Motif
Pfam:
Aconitase_C
Motif
Other DBs
NCBI-ProteinID:
ADW00471
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All DBs
Position
complement(3909154..3909756)
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AA seq
200 aa
AA seq
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MAKFIQHIGLVAPLDAANVDTDAIIPKQFLQKVTRTGFGQHLFNDWRFLDDAGKVPNPDF
VLNLPRYQGATILLARENFGCGSSREHAPWALTDFGFKVVIAPSFADIFYGNAFNNQLLP
VTLSEADIDTLFQLVKENEGIEFVVDLEQQTVNAGGKSYAFEIDPFRRHCMINGLDSIGL
TLQHEHNISAYEKQQPEFLR
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaatttattcaacacattggtttggttgcgccgttagatgcagcaaacgtcgat
accgacgcgattatccctaagcagtttttgcaaaaagtgactcgcacgggctttggtcaa
cacctgtttaacgattggcgttttttggatgatgccggcaaggtaccgaatcctgatttt
gtcctgaacctgcctcgctatcagggtgccactattttgttagcccgtgagaattttggc
tgtggctcctcacgtgaacacgcaccatgggcgctgacggattttggttttaaagtggtt
atcgccccgagttttgctgatattttttatggtaacgcgtttaataaccaattattaccg
gtgacattaagcgaagcggatattgataccttattccaattggttaaagagaatgaaggt
attgagtttgtggttgatctcgagcagcaaacggttaatgccggtggcaaaagctatgct
ttcgaaatcgatcctttccgccgccactgtatgattaatgggttggatagcattggcttg
acgttgcagcatgaacacaatatctcagcatacgaaaaacaacagcctgaatttctacgt
taa
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