Yersinia pestis Harbin 35 (biovar Medievalis): YPC_4073
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Entry
YPC_4073 CDS
T01874
Symbol
lpxC
Name
(GenBank) UDP-3-O-acyl N-acetylglucosamine deacetylase
KO
K02535
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:
3.5.1.108
]
Organism
yph
Yersinia pestis Harbin 35 (biovar Medievalis)
Pathway
yph00540
Lipopolysaccharide biosynthesis
yph01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
yph00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
YPC_4073 (lpxC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
yph01005
]
YPC_4073 (lpxC)
Enzymes [BR:
yph01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
YPC_4073 (lpxC)
Lipopolysaccharide biosynthesis proteins [BR:
yph01005
]
Lipid A
YPC_4073 (lpxC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LpxC
DUF6225
Motif
Other DBs
NCBI-ProteinID:
ADW00499
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All DBs
Position
3942652..3943572
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AA seq
306 aa
AA seq
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MIKQRTLKRIVQATGVGLHTGKKVTLTMRPAPANTGVIYRRTDLNPPVDFPADAKSVRDT
MLCTCLVNEHDVRISTVEHLNAALAGLGIDNIIIEVNAPEVPIMDGSASPFVYLLLDAGI
EELNSAKKFLRLKETVRVEDGDKWAELSPFNGFRLDFTIDFNHPAIDSSTQRYCLDFSAD
SFVRQISRARTFGFMRDIEYLQSRGLCLGGSFDCAIVVDDYRVLNEDGLRFEDEFVRHKM
LDAIGDLFMCGHNIIGAFTAYKSGHALNNKLLQAVLAKQEAWEFVTFQDEAEMPLAFKAP
STVLAY
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaacaaaggactttaaaacgtattgttcaggcgacgggtgtcggtttgcacacc
ggtaaaaaagtcacgctgacaatgcgacccgcgccggctaataccggggtcatctatcgt
cgcactgacttgaatccaccggttgattttccggcagatgcaaaatccgtgcgtgatacc
atgctctgtacttgcctggtcaatgagcatgacgtgcgtatttctactgttgaacatctc
aacgctgctttggcagggttagggattgataacattattattgaagttaacgcccccgaa
gtaccaatcatggatggcagcgccagtccattcgtgtacttattgctggatgccggtatt
gaagagttaaactcagcgaagaaattcctgcgtttgaaagagacagtacgggttgaagat
ggtgataaatgggctgaattgtctcccttcaatggattccgtttggactttaccattgat
tttaatcacccggcgattgactcaagtacacagcgttattgcttagatttctcggccgat
tctttcgtccgccaaatcagccgtgcgcgtacttttggtttcatgcgtgatatcgaatat
ctgcagtcccgcggtttgtgcctgggcggtagtttcgattgtgccatcgtggtagatgat
taccgcgtattaaatgaagatggcctacgctttgaagatgagtttgttcgtcacaaaatg
ttggacgctattggcgacctgtttatgtgcggccataatattattggcgcatttacggcg
tacaaatctggtcatgccttaaataacaagctgttgcaggctgttttagcgaagcaagaa
gcttgggaatttgtgacgttccaagatgaagctgaaatgcctttggcattcaaagcaccg
tctacagtattagcttactaa
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