Yersinia pestis Harbin35: CH55_3320
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Entry
CH55_3320 CDS
T03717
Name
(GenBank) RND transporter, hydrophobe/amphiphile efflux-1 family protein
KO
K18138
multidrug efflux pump
Organism
ypj
Yersinia pestis Harbin35
Pathway
ypj01501
beta-Lactam resistance
ypj01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
ypj00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
CH55_3320
01503 Cationic antimicrobial peptide (CAMP) resistance
CH55_3320
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ypj02000
]
CH55_3320
01504 Antimicrobial resistance genes [BR:
ypj01504
]
CH55_3320
Transporters [BR:
ypj02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
CH55_3320
Antimicrobial resistance genes [BR:
ypj01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
CH55_3320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
AJK08391
UniProt:
A0A3N4BT88
A0AA97PYM6
LinkDB
All DBs
Position
complement(3608083..3611202)
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AA seq
1039 aa
AA seq
DB search
MLHFFIRRPKFAIVIALVITLVGWVSLYVIPVEQYPDITPPVVSVSAVYPGASARDVAQA
VASPLEAQVNGVSHMLYMESTSANNGSYQLSITFASGTDPDMAAVEVQNRISQVSAQLPA
EVNENGISVRKRASNLLLGVSVFSPQQTHDALFVSNYTSIQLRDAIARISGVGDVQVFGA
RDYSMRVWLDPQRMESLNVSVQDIVAALQQQNVQAAAGQIGSSPSMPNQQQTLTISGQGR
LTDARQFADVIIRSNPQGGMIRLGDVARVALGAQNYQVSAAQNQTESAFLVVYPVPGANA
LNVANGVRDEMARLSAAFPADLTYEINYDSTLPVTATLHEIAVSLTLTLIVVLAVVYLFL
QSLRATFIVALTVPVSLLGTFAVLYVFGYSANTLSLFAIILALTIVVDDAIVVVENVERL
LSNDPHLSPAEATRQAMSQIAGPIIATTLVLMAVFVPIAILPGIIGELYRQFAVTLSAAV
ILSSINALTLSPALCAVLLKRRTLATTGMFGTINKGLDRARDGYVGLTGRINRRAVFSIA
ALLLVGLATWWGYSRLPTSFLPEEDQGYFFVSLQLPDGASLNRTQTVMDQMYQQVSTNEA
VEDVIKITGFSLLSGNNAPNAGFAIVMLKPWGQRPHIDRVLASIQANLAAIPSAMIMAVN
PPAIAGLGSASGFDLRIQALLGQSPQELAQVSQGIIFAANQDPTLSRVFTTFSASVPETN
LSIDRDRAALLQVPVSRIFQTLQTSLGGMNAGDFTLNNRMFRVQLQNDMNFRQRTAQINN
LNVRSDNGALVSLANLVTLTPSVGAPFISNFNQFPSVAISGSAADGASSGQAMAAMEALL
AQNLPQGYSYSWSGMSWQEQQTGGQVVFIYLAALVFAYLFLVAQYESWSIPLVVVLSVVF
AVGGAVAGLSAMGFANDVYAQIGLVLLIGLAAKNAILIVEFSKARREEGASIAEAAQDGA
KQRFRAVMMTAISFILGVMPLVFASGAGAMSRQIIGITVFGGMLMATAVGILFIPALYLH
IQRLREWTKNRKQDVDESL
NT seq
3120 nt
NT seq
+upstream
nt +downstream
nt
atgttgcatttctttattcgtcgccccaagtttgccattgttatcgcattggtgatcacc
ctggttggctgggtttcactgtatgttatcccggtcgagcaatacccggatatcacgccg
ccggtggtctccgtcagtgctgtttatcccggtgccagcgccagagacgtggcgcaagcc
gtcgcgtcaccactggaagcgcaggtcaatggcgtcagccatatgttgtacatggaatca
accagcgccaataacggcagctaccaattgagcattacctttgccagtggcaccgatccc
gatatggcggcggttgaggtacaaaaccgcatttcacaggtgagcgcgcaactgcctgcc
gaggtgaatgaaaatggcatctcggtacgcaaacgtgcgtcaaacctactattaggggtc
agcgttttctccccgcaacagacccatgacgcactgtttgtcagtaactacaccagcata
caattgcgtgatgctattgcacgtatcagtggtgtcggtgatgtacaggtctttggtgcg
cgcgattacagtatgcgtgtctggctggatccacagcgcatggaatcactgaatgtcagc
gtgcaggatatcgttgccgcgttacaacagcagaacgtacaagcggcggcagggcagata
ggctcttcaccgtcgatgcccaatcaacaacagacactgaccatcagtgggcaggggcgc
ttgaccgatgcacggcagtttgccgatgtgattatccgcagcaaccctcagggcggtatg
atccgcttgggcgatgtggcccgcgtggccttgggggcacagaattatcaggtcagtgcg
gcacaaaaccagactgaatcagccttcttagtggtgtatccggttcccggagccaatgca
cttaatgtggccaatggcgtccgtgatgaaatggcccggctgtcggccgcctttccggcg
gatctcacctatgaaattaattacgactccaccctgccggtgacggcgacactgcatgag
attgcggtgtcactgaccttgacactgattgtggtgctcgccgtggtgtaccttttttta
caaagtctgcgcgcgacctttattgtggcgctcacggttccggtctcgttacttggcacc
tttgctgtgctgtatgtctttggttattcagccaatactctcagtttgttcgctattatt
ctggccctgaccattgtggtggatgatgccattgtggtggtcgaaaacgttgagcggtta
ttgtcgaacgaccctcatctttcaccggcagaggccacccggcaggcgatgagccagatt
gccgggccgatcatcgccaccacactggtgttgatggcggtatttgtgccaatcgctatc
ttgccggggattattggcgagttgtatcgccagtttgcggtaacgctttcggcggcggtc
attctctccagtatcaatgcgttaacgctgagtccggcgctgtgtgccgttctgcttaag
cggcgcacactcgcaacgactggcatgttcggcacgattaacaaggggcttgatcgcgcc
cgtgatggttatgttggcttaacggggcggatcaaccgccgtgcggtatttagtatcgcc
gcgctgctactggtggggttagcaacatggtggggttatagccgactgccaacctcgttc
ctaccagaggaagatcagggctatttctttgtcagcttacaattgccagatggtgcctca
ctgaaccgaacccaaacggtgatggaccagatgtatcaacaggtgagcacgaatgaggcc
gttgaggatgtaataaaaattacggggttcagcctgctcagtggcaacaatgcgcccaat
gccggttttgctattgtgatgctaaaaccttggggccagcggccgcatattgatcgggtg
ctagccagtattcaggccaatctggcggctatcccctcggcaatgattatggcggtgaac
ccgccagcgattgccggtttgggcagtgcttcgggctttgatttgcgcattcaggcactg
ctaggccaatcgccgcaagagctggcgcaggtgagccaagggattatttttgccgccaat
caggacccgacattgagccgggtctttaccaccttcagtgcttcggtgcctgaaaccaat
ttgagtatcgatcgtgaccgcgcggccttgttacaagtgccggtcagccgaatcttccaa
acgctgcaaacctcgctgggggggatgaatgccggtgatttcaccttgaataaccgtatg
ttccgggtgcaattacaaaacgatatgaatttccgccagcgcacggcgcagatcaataac
ctaaatgtacgcagcgataacggggcattagtcagtttggcgaacctggtcacgttgacc
ccgtcagtgggcgcgccctttatcagtaatttcaaccagttcccttcggttgcgatcagc
ggttcagcggctgatggggccagctcaggtcaggcgatggcggcaatggaagcgctattg
gcgcagaatttaccgcaaggctacagctacagttggagcgggatgtcatggcaagagcag
cagaccggcgggcaagtggtgtttatttatcttgcggcgctggtcttcgcttatctgttt
ttagtcgcccagtatgaaagctggagtatcccgctggtggtggttctctcggtggtgttt
gccgtggggggggcggtggcggggctatcggcgatggggtttgccaacgatgtgtatgcg
caaataggcttagtgctactgatcgggttggcggcaaagaatgcgattctgattgtcgaa
ttctccaaggcgcggcgagaagagggggcgagtattgcggaggctgcacaggacggcgct
aaacagcgtttccgcgccgtgatgatgaccgctatttcgtttatcctcggcgtgatgccg
ttggtttttgccagcggtgccggggcgatgagccgccagattattggtatcacggtattt
ggcggcatgttgatggctaccgccgtagggatcttatttattccggcgctgtatctgcat
attcaacggttgcgcgagtggacaaaaaaccgcaagcaggatgttgacgaaagcctgtaa
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